Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g1870 | ATGCATGGACGTGGATGTGAGAAGGGTACTCGGCACATGTGGAAAGCCCCCACACGTGGTGACTCGTCTCTGAACGCCGATGTTTCTTCGTCTTCTTCGTCGTCGTCGTCGACTGTGAAGTTGTTCTTTAAGGACCGTCGCAAAATTAGTGTTGGTGAATGTGCTCTCTTCAAAGTATCTGAAGATTGCCCACCATTTATTGGTATAATTCGTTATCTGACAATTGGCAAAGATAAAAAGTTGAAGTTTGGTGTTAGTTGGCTCTATCGATCCATTGAAGTAAAACTCAGCAAGGGCGTGCCATTGGAGGCTGCTCCAAACGAAATCTTCTACACCTTCCATAAGGATGAGATTGATGCTGAAGCATTGCTCCATCCTTGTAAAGTTGCATTTCTTCCTAAGGGGGCTGAACTTCAACCAGGGATTTCTTCATTTCTGTGCAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGTTAAATGATCAAGATTATATTAATGATTGTCAAGAAGAAGTAGATAAACTATTATACAGGAATTGTGTAGAAATGCATGCTACAGTACAGCCAGGTGGCCGTTCTCCTAAACCTATGAGTAGTCCAACATCAACATCACAGTTAAAATCTGCTTCAGATAGTGTCCAGAATAGTACTTCTTCCTTTCCATCTCACATTAAGGGGAGGAAAAGGGAAAGGGCAGATCAAGGCTCTGAGTCCGTCAAGCGAGAGCGATCAATAAAAGCTGAGGATGGGGATTCTGGCAATTTCAGGCATGATAATATTTTCAAGACAGAGATTGCAAAAATTACTGAGAAGGGAGGGCTTGTTGATGGTGAAGGAGTTGAAAAATTAGTGCAGCTGATGGTTCCTGATAGAAATGAGAAGAAGATAGATATAGCTAGCCGGTCATTGCTTGCAGCTGTCATTGCAGCAACAGATAAGTTAGATTGTCTTAGTCAGTTTGTGCAGCTAAGGGGTTTGCCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAGGGGAAGATTGGTGATGGTGATAAATCTGCTGAGGAATTTCTGTTGGTATTGCTTCGGGCACTTGATAAACTTCCAGTAAATCTTCAGGCTTTACAAACATGCAACATTGGAAAATCTGTGAATCATTTGCGAACTCACAAAAACACTGAAATTCAGAGGAAAGCAAGAGGTTTAGTTGATACATGGAAGAAACGTGTTGAAGCAGAAATGAATATAAATGATGCAAAGTCTGGTTCAGGTCCCAATGTCCACTGGCCTGCCAAATCACGTCCTTCTGATGTTGGTCAAGGTGGGAATAGACATTCAGGTGCATCATCAGATGTTGGCATGAAGAGTTCAGTTACACAGCTTTCTGCTTCCAAAACTGCCTCTGTGAAGATTGTCCAGGGAGAGAATATTACTAGATCAGCATTGACATCTGCATTTCCAGGGCCTGCAAAATCGGCGCCGTCACCTGCAGCTGTGACTGCAAACTTAAAAGATGGGCAGCCTCGTATTGTTGCAGTCAATGGAGGTTCTGATCTTCCCATGGCAAATGCAAGGGATGAGAAAAGTTGTAGTTCTAGTCAATCTCACAACAACAGTCAATCTTGTTCTAGCGACCATGCTAAAACTGGAGGTCACTCAGTAAAGGAGGATGCCAGAAGCTCTACTGCAATGAGTGTGAATAAGATTTCTGGAGGCTCTTCACGACATCGAAAATCCATTAATGGATTTTCAGGTTCAACTCCATCTGGAGGGCAAAGGGAAACTGGATCAAGTAGGAATTCCTCCTTGCACAAAAATTTAACTTCAGAGAAAATATCTCCACCAGGATTAATGGACAAGGCAGTTGATGGAACTTCTCTTGACGGCAATATTCCAAAGCTGATTGTTAAGATTCCAAACCAAGGTAGAAGTCCTGCACAAAGTGTCAGTGCTGGTTCTTTTGATGATCCTACAATCATGAATAGTCGAGCCTCATCCCCTGTTCTTCCTGATAAGCATGATCAGTCTGATCACAGCCCAAAGGAAAAGAGCGACCTTTATCGAGTGAATATTGGCTCAGATATTAATACCGAATCTTGGCAGAGTAATGATTTTAAAGACGTATTGACTGGCTCTGATGAGGGTGATGGATCACCTGCTGCAGTTACTGATGAAGAGCACTGTCGTACTGGCAATGATTGTAAGAAGGCATTGGAGGTATCAAAAGCTGCTTCATCATCATCTGGAAATGAACATAAAGCTGGCAATATGCAGGATGCTTCTTACAGCTCGATAAATGCTTTAATTGAAGGTGTTAAGTACTCTGAAGCTGATGATGGTGGAATGAACCTTCTTGCTAGTGTGGCTGCTGGAGAAATATTGAAATCTGAGTTGTTAACTCCGGCTGGATCTCCAGAAAGAAACACAACTGCTGTCGAGCAGTCATGCACAGACAATGGTGTTAATAAGTCCTCTGAAGAAAATCTTGTTCGGGATGAATGCCACTCAAATAATGGTCTTGATGGTGAACATAAGAATCTGGCTTCTGTAACAGGTGATTTAGGGGCAAATGATGAAAGCGATTCTGATTTTCAAGCATCTGGAGGTAAAGCTGCAAGAGAGCTAAATAAGCGTGTTAATGCATGTAGTATGGATTTGCAACAGGTTACTGAAACTACTTTGGAAAGCAAAGGAAAATTAAATGAAAAATCTGGACCTACTTCACTGGGTGGTCTTGCTGAAAATTCTGTGCAAGAAGCTGGAGATGCTGACAGAAGCAAGCAGCTCCAGGAGGTTGTTCAGGGAGTGAATGCTGGCGAAACCCATGATAAGGTTAGTTGTGTTGCAGAAGTTGAGGCAGAAGCAGCTAAAAAATTGTTACATACAGCTGTGGAAGTGGATGCACAAAGTGATAACTGTACTGCTGAAGGATCAAGTGGCTGTGGACAGTTAGTTAAAAAGCCTCCTGCTATACTTGTGCAGTCTGATTTGGCAAGTGGAAAAGATGATAATGCACTCCATTCTTCTGGTTATAGTGTTGATGAGGTTCCTAAAGACTTCACTGATAGGGAATCTGAGAAAACTGATGATGTTGATGCTGAGAATCATGTCAGTCAGTCTAAAAATAAAAGAAATGAGTCTGAAAGTGATGCCTTGACTATGCCTGAGAATAAAGGTTTATGTTCTGTTGTGACTGGTCTTGTTGCTGAACATGTGGAGGAGAATTTAGAAGCGAAAGAGGTTCGTGATCAACCTGCTAGAGAGGATCCTCCTGAAGATTCACCTAGTGTTCGTTCACAAGAAATAGATAAGCATCTAGATTCCAAAAGATTAAAATTGACTTCCACAGAAACAGAGGAGGCTGAGGAGTGTACCTCTACCACTGCAGATGCTTCTTCCATGTCTGCTGCAGCTGTGTCAGATGTGGATGCAAAGGTTGGATTTGATTTAAATGAAGGGCTCAATGCAGATGATGGAAGATGTGAGTTCAACAGCATTGTCACTTCTGGATGTGCACCTGCAGGTCAATTGATCAGTCCTGTGCCATTTCCTGCTTCATCAATGTCTGGTATTCTTGCCCCAGTTACTGTGGCGTCTGCTGCTAAGGGGCACTTTGTACCTCCGGAAGATTTATTGAGAAGTAAAGGGGAAATTGGTTGGAAGGGATCAGCTGCCACCAGTGCATTCAGGCCTGCCGAACCCAGGAAAGTTATGGAAATGCCTCTTGGTACATCAGCTACCCCTATTGCTGATGCTCCAGCTGGAAAACAGAGTCGAGCACCGTTGAATATTGACTTGAATGTCGCCGATGAAAGAATACTTGATGATATTTCTTGTGCACGACACACAAATTCTATATCTCTTGCAACTGATTGTCATGATCCTGTATGCAGTAAGATACCTTCACCTGTTCGCAGCTCTGGAGGGCTTGGTCTTGACTTGAACCAAGCGGACGATGCTTCTGATATTGACATTTGCTTGAGTAGTAATCATAAAATTGATGTGCCAACTATGCAGGGGAAGTCATCATTGGGTGGTCCACCAAATAGAGAAGCGAATGTTCACAGGGACTTTGATTTGAACAACGGACCTTCTGTTGATGAAGTCACCACTGAATCCTCATTCTTCTCTCAGTATGCCAGGAGCAGTGTGCCATCTCAATTACCTGTTTCTGGACTTAGAGTAACTACTGCTGAGCCAGGCAACTTCTCTTGGCTTCCTTCCAGTGGGAACACCTATTCTGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAGTTGTTACTCCAAATGGGCCACAAAGGTTGCTGACTCCTGCTGCTGGTGGCAACCCATTTGGACCAGATATTTATAGGGCTCCTGTATTGTCATCTTCTCCTGCAGTGTCGTATCCATCTGCTCCATTTGAATATCCTGTCTTCCCTTTTAACTCCAGCTTCCCTCTTCCATCAGCTTCTTTTTCTGCTGGATCAACTGCTTATGTATATCCAACATCTGCCAATCGGCTTTGCTTCCCTGCAGTAAATTCACAGTTAATGGGGCCTGCTGGCACGGTTTCATCTCATTACCCCAGGCCTTATGTTGTTGGTCTTACAGAAGGTAGCAATAGTGGTAGTGCTGAGACCAGTAGAAAATGGACAAGGCAAGGTTTAGATCTTAATGCTGGACCTGGGTGTTCAGACATGGAAGGGAGAGATGAGAGTTCACCTCTTCCATCTAGGCAACTTTCTGTTGCTAGTTCACAGGCCCTAGCTGAGGAGCAAGCAAGGATCCAGCTCGCAGGTAGTGTTCGCAAGAGAAAGGAGCCCGATGGTGGGTGGGATGGCTACAACCAATCCTCATGGCAATAG | 4854 | 0.4351 | MHGRGCEKGTRHMWKAPTRGDSSLNADVSSSSSSSSSTVKLFFKDRRKISVGECALFKVSEDCPPFIGIIRYLTIGKDKKLKFGVSWLYRSIEVKLSKGVPLEAAPNEIFYTFHKDEIDAEALLHPCKVAFLPKGAELQPGISSFLCRRVYDIANKCLWWLNDQDYINDCQEEVDKLLYRNCVEMHATVQPGGRSPKPMSSPTSTSQLKSASDSVQNSTSSFPSHIKGRKRERADQGSESVKRERSIKAEDGDSGNFRHDNIFKTEIAKITEKGGLVDGEGVEKLVQLMVPDRNEKKIDIASRSLLAAVIAATDKLDCLSQFVQLRGLPVFDEWLQEVHKGKIGDGDKSAEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNTEIQRKARGLVDTWKKRVEAEMNINDAKSGSGPNVHWPAKSRPSDVGQGGNRHSGASSDVGMKSSVTQLSASKTASVKIVQGENITRSALTSAFPGPAKSAPSPAAVTANLKDGQPRIVAVNGGSDLPMANARDEKSCSSSQSHNNSQSCSSDHAKTGGHSVKEDARSSTAMSVNKISGGSSRHRKSINGFSGSTPSGGQRETGSSRNSSLHKNLTSEKISPPGLMDKAVDGTSLDGNIPKLIVKIPNQGRSPAQSVSAGSFDDPTIMNSRASSPVLPDKHDQSDHSPKEKSDLYRVNIGSDINTESWQSNDFKDVLTGSDEGDGSPAAVTDEEHCRTGNDCKKALEVSKAASSSSGNEHKAGNMQDASYSSINALIEGVKYSEADDGGMNLLASVAAGEILKSELLTPAGSPERNTTAVEQSCTDNGVNKSSEENLVRDECHSNNGLDGEHKNLASVTGDLGANDESDSDFQASGGKAARELNKRVNACSMDLQQVTETTLESKGKLNEKSGPTSLGGLAENSVQEAGDADRSKQLQEVVQGVNAGETHDKVSCVAEVEAEAAKKLLHTAVEVDAQSDNCTAEGSSGCGQLVKKPPAILVQSDLASGKDDNALHSSGYSVDEVPKDFTDRESEKTDDVDAENHVSQSKNKRNESESDALTMPENKGLCSVVTGLVAEHVEENLEAKEVRDQPAREDPPEDSPSVRSQEIDKHLDSKRLKLTSTETEEAEECTSTTADASSMSAAAVSDVDAKVGFDLNEGLNADDGRCEFNSIVTSGCAPAGQLISPVPFPASSMSGILAPVTVASAAKGHFVPPEDLLRSKGEIGWKGSAATSAFRPAEPRKVMEMPLGTSATPIADAPAGKQSRAPLNIDLNVADERILDDISCARHTNSISLATDCHDPVCSKIPSPVRSSGGLGLDLNQADDASDIDICLSSNHKIDVPTMQGKSSLGGPPNREANVHRDFDLNNGPSVDEVTTESSFFSQYARSSVPSQLPVSGLRVTTAEPGNFSWLPSSGNTYSAVTISSIMPDRGDQPFSVVTPNGPQRLLTPAAGGNPFGPDIYRAPVLSSSPAVSYPSAPFEYPVFPFNSSFPLPSASFSAGSTAYVYPTSANRLCFPAVNSQLMGPAGTVSSHYPRPYVVGLTEGSNSGSAETSRKWTRQGLDLNAGPGCSDMEGRDESSPLPSRQLSVASSQALAEEQARIQLAGSVRKRKEPDGGWDGYNQSSWQ* | 1618 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 479 | 621 | - | - | |
Pvu9g1870 | 1617 | Pfam | BAH domain | 48 | 155 | IPR001025 | GO:0003682 | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 996 | 1053 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 225 | 255 | - | - | |
Pvu9g1870 | 1617 | SMART | TFS2_5 | 335 | 408 | IPR003617 | GO:0005634 | |
Pvu9g1870 | 1617 | SMART | BAH_4 | 47 | 162 | IPR001025 | GO:0003682 | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 1534 | 1550 | - | - | |
Pvu9g1870 | 1617 | PANTHER | BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 1617 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 194 | 224 | - | - | |
Pvu9g1870 | 1617 | ProSiteProfiles | TFIIS N-terminal domain profile. | 329 | 409 | IPR017923 | - | |
Pvu9g1870 | 1617 | PANTHER | BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 1617 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 889 | 922 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 1571 | 1588 | - | - | |
Pvu9g1870 | 1617 | Gene3D | - | 34 | 271 | IPR043151 | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 666 | 682 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 698 | 723 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 1012 | 1047 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Pvu9g1870 | 1617 | ProSiteProfiles | BAH domain profile. | 47 | 162 | IPR001025 | GO:0003682 | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 798 | 820 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 796 | 866 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 552 | 605 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 821 | 836 | - | - | |
Pvu9g1870 | 1617 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 317 | 420 | IPR035441 | - | |
Pvu9g1870 | 1617 | Pfam | TFIIS helical bundle-like domain | 357 | 406 | IPR017923 | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 522 | 544 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 637 | 665 | - | - | |
Pvu9g1870 | 1617 | CDD | TFIIS_I | 342 | 407 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 634 | 682 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 435 | 451 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 189 | 255 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 1072 | 1115 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 412 | 451 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 889 | 910 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 1072 | 1125 | - | - | |
Pvu9g1870 | 1617 | MobiDBLite | consensus disorder prediction | 1534 | 1617 | - | - | |
Pvu9g1870 | 1617 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 281 | 410 | IPR035441 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g1870 | Pvu-Chr9 | 26621633 | 26628943 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Pvu9g1870 | BAH | 5.6e-08 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g1870 | - | - | gmx:100788512 | 2581.21 |