Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1868 ATGAGAGTAAAACTCATCTGGGCATTCTTCATTGCAATCTTTTTGTTTCTTCTACTGGCCAATTCAGAAGAACAAGAGGTGATCAATGCCCTGGTCACATTCATGGATAAATTGGCACCAGGGTATGTACCAAGAGACTCTACGTGGGGTTGGAACGTTTCATCAGATCCCTGCAAAGATAAGTGGCACGGTGTGAGGTGCCACTCAGATAACAAACTCGTTATGAGTGTGACTCTTGAGAAGTTGAATTTTGGTGGAAGTTTAGACGCCGGTTCTCTTTGCATTGCAAAGTCTCTTCAAATGCTTAGCCTAAAGGACAACACTTTACATGGTTCGATATCAGAGGATATAGGAAAGTGCAAGTTATTGACTCACTTGTTTTTAAGTGGGAACCAATTCTCTGGGGACCTTCCTATTTCTATTGCCAAGCTAAGTAACATGAAACGGCTTTATATTTCGGACAACCACTTAACTGGAGAGCTTCCTAACATGGTTCATGTTTCAAGTTTGATATCCTTCGTTGCTCAAAACAACAACTTCACTGGGGAGATTCCTAGTTATGACTTCTCCAACCTTGAAGAGTTTAATGTCTCTGACAACAATTTACATGGTCCAGTTCCTGATCTCAGAGGCCAATTCCATGCAGACAGCTTTTCTGGGAATCCTAACTTATGTGGGGAACCACTTTCAAATGCATGTCCTCCTCCACCACCACCACCAGAAAAGAAGGACAAAAAATCGTTCCCTAATGATTTGTCCATTTATTCAGGTTACCTAGTCCTTGGTTTAATTACGCTGATTTTCTTGACCTTTAAACTGTTATGTAGGTTCAAGACCAAAGAAAAAGAATTGGAAGTTGAAAAGAAGGAAAAGGCACAAGAAAGTGTTGGTATTGTTGCCAAGACTAGTGAAATATCCAATTCCAATGGATCAAAGAATGGCACTGGGATCATATCCGAGTATTCGTTGACATCTTTGGAAAGTGGGATGACAACATCAGGTCTTGTTCTTCTTTCAAGTCGAACCCTCAGAGGATTGCAATTTGAGGACTTGCTTGGTGCTCCTGCTGAATTGATTAGGAGGGGAAAGCACGGAAGCCTCTACAAGGTTATGCTCGATAATGGGGTGCTGTTGGCAGTGAAGAGGATTAAAGATTGGGGGATTTCTAAGCAAGATTTTCAGAGCAGGATGAATTTGATAGCCCAGGTGAAGCATCCACACGTATTGCCACCTGTTGCATACTATTGTTCTCAGCAAGAGAAGCTCCTAGCATATGAATATATGCAGAATGGTAGTCTCTTCATGTTGCTCTATGGATCTCAAAGTGGCCACTCTTTTGACTGGGTAAGCAGACTAAATGTTGCTGCTAAGATTGCTGAGGCTTTGACATATATGCATGAGGAGTTTCTTGAGAATGGAATAGCACATGGTAACCTAAAGTCAAATAACATTTTGTTTGACAAGAATATGGATCCACGCATAAGCGAATATGGCCTAATGGTTGCAGAAAATCAAGATCAATTTGTCATTTCGCACAACAAAGGCCTCAAAAGCAAAGATCTAATTGCAGCCACCTTCAAAGCTGATGTATACTCCTTCGGTATGATTCTTCTCGAGCTGTTGTCAGGGAAAGTAAATAAAAATGATGGATTTGATCTAGTTAAATGGGCGAATTCAGTGGTAAGAGAGGAATGGACCATCGAAGTTTTTGATAAGTCCCTAATCTCACAGGGTGCTTCGGAAGAGAGGATGATGAATTTGTTGCAGGTAGCATTAAAATGCTTAAATCCTTCTCCAGATGATAGGCCAAGCATGAGCCAAGTTGTTGTGATGACAAATGCTTTGATAGAGGAGGAAGAGAAATCCATATCCTTTGAAACATGA 1884 0.4103 MRVKLIWAFFIAIFLFLLLANSEEQEVINALVTFMDKLAPGYVPRDSTWGWNVSSDPCKDKWHGVRCHSDNKLVMSVTLEKLNFGGSLDAGSLCIAKSLQMLSLKDNTLHGSISEDIGKCKLLTHLFLSGNQFSGDLPISIAKLSNMKRLYISDNHLTGELPNMVHVSSLISFVAQNNNFTGEIPSYDFSNLEEFNVSDNNLHGPVPDLRGQFHADSFSGNPNLCGEPLSNACPPPPPPPEKKDKKSFPNDLSIYSGYLVLGLITLIFLTFKLLCRFKTKEKELEVEKKEKAQESVGIVAKTSEISNSNGSKNGTGIISEYSLTSLESGMTTSGLVLLSSRTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKQDFQSRMNLIAQVKHPHVLPPVAYYCSQQEKLLAYEYMQNGSLFMLLYGSQSGHSFDWVSRLNVAAKIAEALTYMHEEFLENGIAHGNLKSNNILFDKNMDPRISEYGLMVAENQDQFVISHNKGLKSKDLIAATFKADVYSFGMILLELLSGKVNKNDGFDLVKWANSVVREEWTIEVFDKSLISQGASEERMMNLLQVALKCLNPSPDDRPSMSQVVVMTNALIEEEEKSISFET* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1868 627 PANTHER LRR RECEPTOR-LIKE KINASE 4 626 - -
Pvu9g1868 627 Pfam Protein kinase domain 359 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1868 627 MobiDBLite consensus disorder prediction 226 247 - -
Pvu9g1868 627 ProSiteProfiles Protein kinase domain profile. 353 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1868 627 Gene3D Ribonuclease Inhibitor 189 236 IPR032675 -
Pvu9g1868 627 PANTHER OS05G0588300 PROTEIN 4 626 - -
Pvu9g1868 627 SUPERFAMILY L domain-like 50 229 - -
Pvu9g1868 627 Gene3D Ribonuclease Inhibitor 25 188 IPR032675 -
Pvu9g1868 627 Gene3D Phosphorylase Kinase; domain 1 342 427 - -
Pvu9g1868 627 SUPERFAMILY Protein kinase-like (PK-like) 357 611 IPR011009 -
Pvu9g1868 627 Gene3D Transferase(Phosphotransferase) domain 1 428 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1868 Pvu-Chr9 26594940 26597814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1868 48 609 Receptor kinase-like Gene Family AT1G48480 33.887 2.24e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu9g1868 Pkinase 1.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1868 - - pvu:PHAVU_009G180700g 1206.05