Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1863 ATGCTGAATTTCTCTCGAACTCCCAGATCTCTTCCGCGAGTTATGACTGATCCAGTAATCATTTCTCATGGAGATGGTAAACAAAGTAATGATGATGATTCAGGTGTTTTCTCATCTGAACACCGTCGCAAGATAATTATAGTATCAAATTCTCTTCCTCTCAATGCGAAAAGGGACAAAGTATCTGGCAGATGGTGCTTCAGTTATGATGAAGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATGCTGATGTTGTGTATGTGGGATCTCTGAAGGTTGATGTTGATGCAAGTGAGCAAGATAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAACTGCTTGCCTACTTTTATTCCTCCAGAACTCTACAAACAATTCCATGATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGTTGCCCATGTATCCAGGCAATCGCCGCTTTGATAGATCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTCATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTCCTTCCGACTTTTCTGCGTAAGCGTTGTAGTCGAGTCAAGCTTGGTTTTTTCCTCCACAGTCCATTTCCTTCATCAGAAATTTATAAAACTCTCCCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAGTTGGTTTTCACACCTTTGATTATGCTCGCCATTTTCTCTCCTGCTGCAGGCGAATGCTAGGCTTGGAACATGAATCCAAAAGGGGTTACATAGGGCTTGAATACTCTGGACGGACAATATTCATTAAAATTTTGCCTGCTGGGATTCACATGGGCCGACTTCAATCTGCCTTAGATCACCCTTCCTCTTCTAACAAAGTCAGAGAAATCCACCAACAATTTAAGGGCAAAAAGATTATTCTTGGTGTTGATGATATGGACATATTCAAAGGTGTCAGTTTAAAATTCTTGGCCATAGAACAACTCCTGCAGCAATATCCGGAAATGCAAGGTCAAATAGTACTGATCCAAATTTTAAACCCCCCAAGTAGTGCTGACAAAGACGTTGACAATGCAAAGGAGGAGGCTTACATTACTTCCAAAAGGATAAATGAAAGGTTTGGTTTGGAAAGTTATGAACCTATCATCATCATTGACCGCCATGTTCCTTTCTATGAGAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTTCGTGACGGTTTGAATTTGGTTCCATACAAGTACACTGTTTGTAGGCAGGGAAGTGCTAAAATGGATGAAGCCTTAGAAATTGCTTCTGACTCCCCCCGTGTAAGTGCACTTGTTGTTTCTGAGTTTATAGGCTGCACACCATCTCTTAGTGGGGCAATAAGGGTGAACCCATGGGATATTGATGCAGTAGCCGAAGCACTAAATTTGGCAATCACAATGCCTGGTGGAGAGAAGCAGCTTCGACATGAGAAGCACTACAGATATGTTAGTTCTCATGATGTGGCCTACTGGGCTAGAAGCTTTGAGCAAGATCTAGTGTTTTCGTGCAAGGATCACCATAGGAACTGTTGCTGGGGCATTGGCTTTGGTCTGAACTTCAGAATTTTGTCTCTGTCTCCTAGTTTCAGGAGGCTATCCATAGACCACATTGTCCCTGCATATAAAAGGAGCAGTTGCAGAGCAATCTTTTTAGATTATGATGGTACAGTTGTACCTCAAGCATCCATTGTGAAAGCCCCCAGTCCTGAAGTCATATCTGTGCTAAATAATCTTTGCAGTGATGTTAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAAGTTCATTGAGTGAATGGTTTGATCAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGATAAGCATGCTAGTTGGGAAATGAGTCATGTAGATACAGATTTTGCATGGAAAAGGATTGCTGAACCTGTGATGAGATCTTATATGGAGGCCACAGACGGCTCCTCTGTAGAGAGCAAAGAGAGTGCCTTGGTATGGCATTACTGTGATGCAGATCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGCTGGATCACCTTGAAAATGTACTTGCGAATGAGCCTGTTGTTGTGAAAAAAGGACAACATATTATCGAAGTCAAGCCTCAGGGAATTACAAAAGGGTTAGTTGCACAGGAAGTTCTTTCTACCCTAACCAAGAAGGGTAAATTGCCAGATTTTGTACTGTGCATTGGTGATGATAGGTCTGATGAGGATATGTTTGAGAGCATTTTAACCAAACCTTACAGTGCTACCTCCTTCTCAGCACCCGAAATCTTTGCATGCACTGTTGGACAAAAACCAAGCAAGGCTAGATACTACCTTGATGACACCATGGATGTGATGTCATTACTTGAGGGTCTTGGTTCTGCTTCAGTGCCTAAATCAAGATATTCTACAGAAACCCCTTTGGAGAAAGGAGAAGTATGTTTTGAGAATATCCTATAA 2550 0.4169 MLNFSRTPRSLPRVMTDPVIISHGDGKQSNDDDSGVFSSEHRRKIIIVSNSLPLNAKRDKVSGRWCFSYDEDSIFWQLKDGLSPDADVVYVGSLKVDVDASEQDKVSLQLLEEFNCLPTFIPPELYKQFHDGFCKQHLWPLFHYMLPMYPGNRRFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCSRVKLGFFLHSPFPSSEIYKTLPVRGEILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYSGRTIFIKILPAGIHMGRLQSALDHPSSSNKVREIHQQFKGKKIILGVDDMDIFKGVSLKFLAIEQLLQQYPEMQGQIVLIQILNPPSSADKDVDNAKEEAYITSKRINERFGLESYEPIIIIDRHVPFYEKAAYYALAECCIVNAVRDGLNLVPYKYTVCRQGSAKMDEALEIASDSPRVSALVVSEFIGCTPSLSGAIRVNPWDIDAVAEALNLAITMPGGEKQLRHEKHYRYVSSHDVAYWARSFEQDLVFSCKDHHRNCCWGIGFGLNFRILSLSPSFRRLSIDHIVPAYKRSSCRAIFLDYDGTVVPQASIVKAPSPEVISVLNNLCSDVNNTVFIVSGRGKSSLSEWFDQCENLGIAAEHGYFIRWDKHASWEMSHVDTDFAWKRIAEPVMRSYMEATDGSSVESKESALVWHYCDADPDFGSWQAMELLDHLENVLANEPVVVKKGQHIIEVKPQGITKGLVAQEVLSTLTKKGKLPDFVLCIGDDRSDEDMFESILTKPYSATSFSAPEIFACTVGQKPSKARYYLDDTMDVMSLLEGLGSASVPKSRYSTETPLEKGEVCFENIL* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1863 849 CDD GT20_TPS 44 527 IPR001830 GO:0003824|GO:0005992
Pvu9g1863 849 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 835 IPR001830 GO:0003824|GO:0005992
Pvu9g1863 849 Pfam Trehalose-phosphatase 578 812 IPR003337 GO:0003824|GO:0005992
Pvu9g1863 849 TIGRFAM T6PP: trehalose-phosphatase 575 822 IPR003337 GO:0003824|GO:0005992
Pvu9g1863 849 Gene3D - 705 835 IPR023214 -
Pvu9g1863 849 Gene3D - 574 686 IPR023214 -
Pvu9g1863 849 Gene3D Glycogen Phosphorylase B; 296 512 - -
Pvu9g1863 849 Pfam Glycosyltransferase family 20 44 527 IPR001830 GO:0003824|GO:0005992
Pvu9g1863 849 SUPERFAMILY HAD-like 575 822 IPR036412 -
Pvu9g1863 849 Gene3D Glycogen Phosphorylase B; 36 295 - -
Pvu9g1863 849 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 576 777 IPR006379 -
Pvu9g1863 849 MobiDBLite consensus disorder prediction 18 37 - -
Pvu9g1863 849 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 835 - -
Pvu9g1863 849 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 44 527 - -
Pvu9g1863 849 CDD HAD_TPP 576 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1863 Pvu-Chr9 26482201 26488228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1863 1 849 Trehalose Biosynthesis Gene Families AT1G23870 65.100 0.0 1186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1863 K16055 - gmx:100812031 1614.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0548 3 6639942 6644949 Pvu9g1863 9 26482201 26488228 ECH
Pvu9g1863 9 26482201 26488228 Pvu9g1863 9 26482201 26488228 ECH
Pvu3g2053 3 41163057 41165961 Pvu9g1863 9 26482201 26488228 PCT