Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1858 ATGAGCAGCGATTTCTATCGACTCGCAGTTTCATCGCACTTCAGCAGTTTCCCCAAATCCTTCTCTCTGCGAAAGAAAGTGCCATGGTGGTACCAAATCCTAAACCCTCGATCAAAGTTCGTTGCCAAATGGAACCGCACCTTCCTCTACGTCTGCATTGCAGCGCTCTTCCTGGACCCTCTCTACTTCTATTTCCCCATCACCGGAGACAAGGCCTGCATGCAGACCGATCTCCTCCTCGGAGTCTTCGTCACCTTGTCGCGTACCGTCGCCGACCTCTTCTTCCTCTTTCACATGGTGCTCAAGTTCCGCACCGCCTACATTGCTCCCACCTCTCGCGTTTATGGCCGCAAAGAACTCGTCACAGACCCTCGTGATATTGCCTCACGCTACCTCAAATCTGATTTCATTATCGATCTCCTTGCAACCCTTCCTCTTCCTCAGATAGTGGTCTGGTTCGTGATTCCGGCGGTGAAAGATTCTAAAGATTCTACGATGGCTCATGTAAACCACACCCTGTCCTTGATTGTTCTGATTCAGTTTATTCCTAGGTTGTTTCAGATTTTCCCTCTGCAACGGAGAATCTTGAAGACTAGTGGACTTATTGCCAAAACTGCCTTGGCAGGAGCCGTATACAATCTTGGCTCCTACATGCTCGCCAGCCATGTTTTAGGAGCTTCGTGGTACGTGGCATCAATTCAGAGGCAGTACGACTGTTGGATAATAACCTGCAAAACGGAGATGAACAAGACGCACTCACCATCCTGTAATCCATCGTTTCTGGACTGTACTAGCCTGGAATACCGCGAAAGGCAAGCTTGGTTCAAACACAGCAGAGTTCTAAGTGATTGCGACGCCCTCAACAACAAAAACGAGTTTCAGTTTGGACTCTTCGCTGATGCTTTTACTGACCACGTTTCCTCATCAAGATTCGTCCAGAAATACTTTTACTGCCTCTGGTGGGGTTTGAAGAATCTAAGTTCATACGGACAAAATCTTCAGACTAGCACTTACAGTGGTGAAACGTTGTTTTCGAGTTTCATATGCATAGCAGGTCTAATCCTGTTCGCGCATCTCATTGGTAACATGCAGAATTATCTGCAATCTTCAACTGCAAGAGTTGAAGAGTGGAGACTTAAACAAAAGGATACAGAAGAGTGGATGAATCACCGGCAGCTTCCAGAAGAACTGCAACAACGTGTTCGAAGGTTTGTTCAATATAAATGGCTGACTACCAGAGGAGTAGACGAAGAAGCCATTTTGCGTGCTTTACCTTTGGACCTTCGCCGCCAGATTCAGAGGCATCTCTGTCTTGACATTGTTCGTCGGGTTCCATTTTTCGGTCAAATGGATAACCAGCTTCTGGACGCAATATGCGAGAGGCTGGTGTCGTCTCTGAACACGAAGAACACGTACATCGTGCGCGAAGGCGATCCGGTGAGGGAGATGCTATTCATCATAAGAGGGCAGGTGGAGAGCTCCACCACAGACGGTGGCAGAACAGGGTTCTACAATTCCATCACCCTCCGCCCGGGCGACTTCTGCGGCGAGGAGTTGCTCACGTGGGCCCTCATGTCCTCCTCCAGCCTCAACCTCCCCTCCTCCACTCGCACCGTCAAGACCATCACCGAAGTCGAGGCCTTCGCGCTCCGAGCTGAGGACCTCAAGTTCGTGGCCAGCCAGTTCAAGCGCCTCCACAGCAAGAAGCTGCAGCACGCCTTCCGCTACTATTCCCACCAGTGGCGGGCCTGGGGTGCCCACTTCATCCAGGCGGCGTGGCGCCGTCACCGCAAGAGGAAGCTGGCCTTGGAGCTGCTGGGGAAGGAGAGCCTGTTCTATAGCAATGTATTGGAGATAGAAGAAGATGATGATGAGGTTGATGTTGGTGATGGAGGTGGTGCGAGTGAGAGTTCGATTGCGCATAGTGTGGGGGCTTTTCAGAATCTTGGGGCTACCGTTTTGGCTTCTAAGTTCGCCGCCAACACCAGAAAAGGAAAGATTAAGAAGGTCAAAATTAATCTTCCCGATTCTGATAGTTTGAAGATGCCCAAGATGTTCAAGCCTACTGAACCCGATTTCTCCACTTTCCACGATTAA 2097 0.4998 MSSDFYRLAVSSHFSSFPKSFSLRKKVPWWYQILNPRSKFVAKWNRTFLYVCIAALFLDPLYFYFPITGDKACMQTDLLLGVFVTLSRTVADLFFLFHMVLKFRTAYIAPTSRVYGRKELVTDPRDIASRYLKSDFIIDLLATLPLPQIVVWFVIPAVKDSKDSTMAHVNHTLSLIVLIQFIPRLFQIFPLQRRILKTSGLIAKTALAGAVYNLGSYMLASHVLGASWYVASIQRQYDCWIITCKTEMNKTHSPSCNPSFLDCTSLEYRERQAWFKHSRVLSDCDALNNKNEFQFGLFADAFTDHVSSSRFVQKYFYCLWWGLKNLSSYGQNLQTSTYSGETLFSSFICIAGLILFAHLIGNMQNYLQSSTARVEEWRLKQKDTEEWMNHRQLPEELQQRVRRFVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLDIVRRVPFFGQMDNQLLDAICERLVSSLNTKNTYIVREGDPVREMLFIIRGQVESSTTDGGRTGFYNSITLRPGDFCGEELLTWALMSSSSLNLPSSTRTVKTITEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRAWGAHFIQAAWRRHRKRKLALELLGKESLFYSNVLEIEEDDDEVDVGDGGGASESSIAHSVGAFQNLGATVLASKFAANTRKGKIKKVKINLPDSDSLKMPKMFKPTEPDFSTFHD* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1858 698 Gene3D - 46 370 - -
Pvu9g1858 698 Gene3D Helix hairpin bin 372 437 - -
Pvu9g1858 698 ProSiteProfiles cAMP/cGMP binding motif profile. 446 576 IPR000595 -
Pvu9g1858 698 CDD CAP_ED 446 577 IPR000595 -
Pvu9g1858 698 Pfam Ion transport protein 44 374 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu9g1858 698 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 696 - -
Pvu9g1858 698 SMART cnmp_10 446 577 IPR000595 -
Pvu9g1858 698 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 8 696 - -
Pvu9g1858 698 SUPERFAMILY cAMP-binding domain-like 375 571 IPR018490 -
Pvu9g1858 698 SUPERFAMILY Voltage-gated potassium channels 36 368 - -
Pvu9g1858 698 Gene3D Jelly Rolls 444 564 IPR014710 -
Pvu9g1858 698 Pfam Cyclic nucleotide-binding domain 469 557 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1858 Pvu-Chr9 26433393 26437098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1858 8 693 Ion Channels AT3G48010 62.764 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1858 K05391 - gmx:100783672 1234.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1858 9 26433393 26437098 Pvu9g1858 9 26433393 26437098 ECH