Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1853 ATGAACATCCACTTCTTCTTCTGCTTCTTCTTGTCGCTCTCATCTTTCCATGTTTCTCTAGCAAGTAAGGACACACCTCTGCCCCAAACACGCGAACGCATAAACCCATTCAGTCCCAAAGCCTCACTCATTCGCTATTGGAACACTCGAGTCACTAGTAAGGTTCCAATCCCTCACTTCCTTCTAGCCAAAGCTTCACCTCTTACCCCACAACACTATGGTATTCTCAACAAACTTTTAAACGAAAAACCCAAACCCTACAATCCGAAGCTTCACCACTCTCTCTGCTCCTCACCGAACTTATACTGTTCCTTCGACGACACACCAAACACGCCCACACTCCAGCGCAAAAATGACGACGCCAACTTCGCCGTTTACAACAACAAACACTTCGCCAACTACGGCACCTCTCGAGTCGACGGAGTCGATTCTTTCAAAAACTACTCCAACGGCCTAAACGCGAACAACGACGCGTTTCGGAGATACAGCGACTCCTCGACGCGCCGCGGCGAACAGTTCAAGAACTATGCCGATAACGGTAATGTTGCGAATACGAACTTCACCAGCTACGGTTCTGCCGCGGCTCAATCCTCCAGCGACTTCAACAACTACGACAAAACGGTGAACGTTCCCAACCTCGGTTTCACCACCTACGACTCCGGCTCCTCCAATCATAAACTCTCGTTCGCCAGCTACGGCAACGAAACAAACTCCGGTGCGCAATCCTTCATGAGCTACGGAAAACGCGTTCGCGGCGGAACTAGCGAGTTCACGAATTACGCCAGCGACGCCAACATTCTGCAATCGGAGTTCAACAATTACGGCGACTTCAGCACCGGAGCAACCAATGACTCCTTCAAGTCCTACAGCTTCAACGGTAACAATCCGCGGAACGTTTTCAAAACATACAGCGCTGGATCGAGAGGATCCGCCGCCGATAATTTTATCAGTTACCGGAACCGCGCCAATGTCGGCGACGACACGTTCCAAAGCTACGCAGCGAGGTCGAAGTCCGGCACCGCCAAGTTCACGAACTACGGCATGTCGTTTAACGTCGGAAACGACAGTTTCGTGGAGTACGGAAAGGGCGCGACGGGGAAGAGCTCGTTCGGGTTTAAATCTTATGGGTTGGGCCGCGCGTTTAAAGTGTACAACAAAAACGACGCGTCGTTTTCGGAGTATCGGAATTTCAGCGCAACTAGTGGCAGAGTTGTAAATAAGCGGGTGGAGCCAGGTAAATTCTTTAGAGAGTCGATAATGAAGGAAGGGAACGTGATTGTGATGCCTGACATTAGGGATAAAATGCCCGCAAGGTCGTTTTTACCCCTGGCAATTGCCTCGAAATTACCGTTCTCGTCTTCAAGGATTGACGAAATGAGGGAATTGTTCGAGGCGCGGGAGGGGTCTGGGACAGAGCGCGTGATAGTGAACGCGTTGAGGGAATGCGAGAGGGCGCCGAGTCGGGGCGAGACGAAACGGTGCGTTGCGTCTGCAGAAGAAATGATAGAGTTTGCGGCATCGGTGCTGGGTCCCAGTGTTGTGGTGAGGAGCACGGAGAACGTGAACGGTTCAGGATCGAGTGTGATGATTGGTAAGGTCTACCCAGTGGACGGTGGAAAAGTAACCAAATCAGTTTCGTGTCATCAGAGTTTGTACCCTTACTTGCTGTATTATTGCCACAGTGTACCCCAAGTGAGAGTGTATGAAGCTGATATTCTCAACGTGGAGACGAAGGAGAACATGAATCATGGTGTTGCCATCTGTCACCTTGACACGTCATCATGGGGCCCAGAACATGGGGCATTCTTGGCATTGGGGTCAGGCCCTGGCAAAATTGAGGTGTGCCACTGGATTTTCGAGAACGACATGACCTGGACCACATGA 1884 0.5101 MNIHFFFCFFLSLSSFHVSLASKDTPLPQTRERINPFSPKASLIRYWNTRVTSKVPIPHFLLAKASPLTPQHYGILNKLLNEKPKPYNPKLHHSLCSSPNLYCSFDDTPNTPTLQRKNDDANFAVYNNKHFANYGTSRVDGVDSFKNYSNGLNANNDAFRRYSDSSTRRGEQFKNYADNGNVANTNFTSYGSAAAQSSSDFNNYDKTVNVPNLGFTTYDSGSSNHKLSFASYGNETNSGAQSFMSYGKRVRGGTSEFTNYASDANILQSEFNNYGDFSTGATNDSFKSYSFNGNNPRNVFKTYSAGSRGSAADNFISYRNRANVGDDTFQSYAARSKSGTAKFTNYGMSFNVGNDSFVEYGKGATGKSSFGFKSYGLGRAFKVYNKNDASFSEYRNFSATSGRVVNKRVEPGKFFRESIMKEGNVIVMPDIRDKMPARSFLPLAIASKLPFSSSRIDEMRELFEAREGSGTERVIVNALRECERAPSRGETKRCVASAEEMIEFAASVLGPSVVVRSTENVNGSGSSVMIGKVYPVDGGKVTKSVSCHQSLYPYLLYYCHSVPQVRVYEADILNVETKENMNHGVAICHLDTSSWGPEHGAFLALGSGPGKIEVCHWIFENDMTWTT* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1853 627 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 5 627 - -
Pvu9g1853 627 ProSiteProfiles BURP domain profile. 414 627 IPR004873 -
Pvu9g1853 627 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 5 627 - -
Pvu9g1853 627 Pfam BURP domain 414 626 IPR004873 -
Pvu9g1853 627 SMART BURP_2 412 627 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1853 Pvu-Chr9 26356444 26358912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1853 - - gmx:100784264 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0538 3 6447930 6450425 Pvu9g1853 9 26356444 26358912 ECH
Pvu9g1853 9 26356444 26358912 Pvu9g1853 9 26356444 26358912 ECH