Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1837 ATGAATATTGAGAAATTGGTGAAAGAAAGCTTTGTCTCACAGCTTTTGCAAGAAAGTTGTATGAAAGATATGATTCCTTTGGGAAATCCTTCATCGCATGAACTCTTGCAACAACATTTTCACAATATTGATGAGTTTCAATTCAGTGTGCCCTCATCCAATAATTCAACATTTCATGCTTTGCACAATTTCACCTTTACACCTTCATCACCTGATTTAGATGTATACGAGTGCAAGCCTTTTACTCATGTTATGGACAATTTCCTTTATGGAGATTCTCAAAGGAATATTGAACTAGATATCATGGTTTCAAATCAAAGCTTTTTGCCTTTTACTCCTCAACAAATCAAGCCCTCCAATTTTGCTTTACCAGATGAAGTTTCATGCATATCCCCAATGAATTATTACAAAGGAATTGGTGTTAACAAAAGCCATAGATCCTATCCAACCACTCGAAGAACATACAAAGTTCACAAGAAGTCCAACACAGTCAAGGGGCATTGGACAATAGAAGAAGATGGATTATTGATTCAACTGGTGGAACAATACGGATTAAGGAAGTGGTCTCATATTGCTAAGATATTGCCTGAAAGAATTGGAAAACAGTGCAGAGAGAGATGGCATAACCATTTAAGGCCTGATATCAAG 648 0.3642 MNIEKLVKESFVSQLLQESCMKDMIPLGNPSSHELLQQHFHNIDEFQFSVPSSNNSTFHALHNFTFTPSSPDLDVYECKPFTHVMDNFLYGDSQRNIELDIMVSNQSFLPFTPQQIKPSNFALPDEVSCISPMNYYKGIGVNKSHRSYPTTRRTYKVHKKSNTVKGHWTIEEDGLLIQLVEQYGLRKWSHIAKILPERIGKQCRERWHNHLRPDIK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1837 216 SUPERFAMILY Homeodomain-like 160 215 IPR009057 -
Pvu9g1837 216 Pfam Myb-like DNA-binding domain 165 211 IPR001005 -
Pvu9g1837 216 CDD SANT 168 211 IPR001005 -
Pvu9g1837 216 ProSiteProfiles Myb-like domain profile. 160 211 IPR001005 -
Pvu9g1837 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 215 IPR017930 -
Pvu9g1837 216 SMART sant 164 213 IPR001005 -
Pvu9g1837 216 Gene3D - 164 216 - -
Pvu9g1837 216 PANTHER BNAC03G62830D PROTEIN 109 216 - -
Pvu9g1837 216 PANTHER MYB PROTEIN-RELATED 109 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1837 Pvu-Chr9 26000967 26001838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1837 114 216 MYB Transcription Factor Family AT4G18770 57.658 3.28e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu9g1837 Myb_DNA-binding 4.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1837 K09422 - gmx:102662267 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2079 3 41494185 41495807 Pvu9g1837 9 26000967 26001838 ECH
Pvu9g1837 9 26000967 26001838 Pvu9g1837 9 26000967 26001838 ECH
Pvu3g2079 3 41494185 41495807 Pvu9g1837 9 26000967 26001838 PCT