Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1825 ATGAACTTGGTTTTCCCTTTTGAGAAACAAAAAGAAATGGAGAACAACCTCTACAACTTTCACTATTCAGCAACTTACTCAGGCCAGTCAACAACAACGGCTCCACCTCCGCCCTCTAAGTCTGTCTTTGGGAAGGAAGATGATGTTTCAGAAGTACTTCGTGACAAAGTTGCTTCTCATCCTCTATTTCCTCACCTCCTCCATGCCTACATCGATTGCCACAAGGTGGGAGCGCCACAAGATATGGCAGACCTATTTGAAGGAATCAAAGGAGAGTATAGTGGGGTGTGTCAGATATCTGACTCTAAATCTGATCATGGCTTCTTGGGTGCTGATCCCGAGCTTGATGATTTCATGGGAACGTTTTGCGATTTGTTGGTGAAGTACAAATCAGATCTTTCAAGACCCTTTAACGAGGCATCCATGTTCCTCAGCCATATGGAAACTCAGCTTCACTCCATCTGCAACGATCTTGCTGTCATAGACAAAACTCTTCTTCAACCTGCAGGTCTTTTCTCTTGTTTCAATGCCATGCTCTTGTTTTCATGTGTTCTCTGA 558 0.4391 MNLVFPFEKQKEMENNLYNFHYSATYSGQSTTTAPPPPSKSVFGKEDDVSEVLRDKVASHPLFPHLLHAYIDCHKVGAPQDMADLFEGIKGEYSGVCQISDSKSDHGFLGADPELDDFMGTFCDLLVKYKSDLSRPFNEASMFLSHMETQLHSICNDLAVIDKTLLQPAGLFSCFNAMLLFSCVL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1825 185 Pfam KNOX1 domain 54 91 IPR005540 GO:0003677|GO:0005634
Pvu9g1825 185 Pfam KNOX2 domain 110 155 IPR005541 GO:0003677|GO:0005634
Pvu9g1825 185 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 45 156 - -
Pvu9g1825 185 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 45 156 - -
Pvu9g1825 185 SMART KNOX1_2 51 95 IPR005540 GO:0003677|GO:0005634
Pvu9g1825 185 SMART KNOX2_2 105 156 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1825 Pvu-Chr9 25808458 25809348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1825 24 156 Homeobox Transcription Factor Family AT1G23380 45.588 8.90e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1825 - - pvu:PHAVU_009G176800g 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1825 9 25808458 25809348 Pvu9g1825 9 25808458 25809348 ECH