Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1816 ATGGTTAGAGGTATGGGTATGAATATAAAAGGAGAAATAGAGAGGGTAAATGGGAAGGAACTGAGTTACAGTGAATTTGTGGAGAGATATATGGAGAAGAACAAACCCGTGGTGCTCACTGGGCTAATGGACCCTCATAATTGGAGAGCTTGCACTGATTGGGTCACACTTAATTCCCAACCCAACTTTCAATTTTTCTCCACTCATTTTGGAGCTTCTAAAGTTCAGGTTGCTGATTGTGACACCAGAGAATTCACTGATCAGAAAAGAGAGGAGATGTTGGTCTCCGATTTTATTGCGCGTTTCGTTCATCTTGGTGAGGCTTCTGCTGTTCAGTGTAATGATGAAACTTGTGCAAGTAATGGTGCCTCTGTGTCAGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCTGAATATGTAGCATATGACACTCCAAGGTTCTTTTGTGATGACTGGCTCAATCTGTATCTTGACAACTTCAGAATCCATATTGATTCTGACAAAGAGCAACCAAATGAGGAAATATGTTGCTCTGACTATCGATTTGTTTACATGGGGGTGAAAGGATCTTGGACTCCTCTTCATGCTGATGTTTTCAGGTCCTACAGCTGGTCGGCAAATGTCTGTGGAAAGAAGAGATGGCTTTTTCTAGATCCTTCCCAATGTCCTCTTATATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTATCAAACTCGAAGTTTCCTGGTTTTAGCAAGGCTATCTGGTTAGAATGCACACAAGATGCTGGTGAAATTATATTTGTTCCCAGCGGATGGTATCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAATTGGTTCAACGCTTATAACCTTTCTTGGGTGTGGAATTTACTTTTAAGGGACTACAATGAGGCCAAGGAATACATAGAAGACATCAAGGATATATGTGATGATTTTGAAGGTCTATGCCAGCGCAATCTTGCTGCTAACACAGGGATGAATTTTTATGACTTCTTTACGTTCATGTCATACTTCACATTGGCCAACTTGGTGTTGCTTCGATATTCAAATAGAAGATATGGAAGTAGTACTGGAAGTTCATCAACAATAGCTCTCCATTTATCCATGAATCTTGGGTGTTTAAGGAAGATCGCTTCAGAGATGAAACAGATGCGTGCTCTAGAAGGAAATCATAATTGCGTCGTGGATATTATCAAAGCATTTGAAGATCCTAGATTTTCCAAATTTTGCATGCATGTAGGAAGAACATATGCCATGGTACATGAGCATTCTCACTTGGCCTCTGATTTCGAGAGCACTACAATGAGTGATTTGGTGGACTTCAATGATTTGAAATCATACTCATCTCAGATCTACACACCTGAAGATCTCATTAAATTTGTAGACAATGGTGTTGCAGAAGCTGAGCCATCTGTACTTCGTGTTGCTTGA 1470 0.3939 MVRGMGMNIKGEIERVNGKELSYSEFVERYMEKNKPVVLTGLMDPHNWRACTDWVTLNSQPNFQFFSTHFGASKVQVADCDTREFTDQKREEMLVSDFIARFVHLGEASAVQCNDETCASNGASVSVPYLKDWHFVKEYPEYVAYDTPRFFCDDWLNLYLDNFRIHIDSDKEQPNEEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQCPLIFDRNMKNCVYNIFDEVSNSKFPGFSKAIWLECTQDAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLAANTGMNFYDFFTFMSYFTLANLVLLRYSNRRYGSSTGSSSTIALHLSMNLGCLRKIASEMKQMRALEGNHNCVVDIIKAFEDPRFSKFCMHVGRTYAMVHEHSHLASDFESTTMSDLVDFNDLKSYSSQIYTPEDLIKFVDNGVAEAEPSVLRVA* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1816 489 SUPERFAMILY Clavaminate synthase-like 8 320 - -
Pvu9g1816 489 Pfam Cupin-like domain 25 291 IPR041667 -
Pvu9g1816 489 SMART cupin_9 128 308 IPR003347 -
Pvu9g1816 489 ProSiteProfiles JmjC domain profile. 136 308 IPR003347 -
Pvu9g1816 489 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 10 480 - -
Pvu9g1816 489 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 10 480 - -
Pvu9g1816 489 Gene3D Cupin 5 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1816 Pvu-Chr9 25651395 25655751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1816 11 300 Glycosyltransferase AT1G78280 25.333 9.07e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pvu9g1816 Cupin_8 7.1e-23 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1816 - - gmx:100803814 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1816 9 25651395 25655751 Pvu9g1816 9 25651395 25655751 ECH