Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1805 ATGGCCTCAGCTTCGCAAAAGGCGACGCCACCACCACCGCCGTCGCCGTCCTCTTCTTGTTGTTCCGCCGCCGCCGACTCCGCCGCCATTCCCCGCGCCGCCGCCACGCCGCAAGACTGGACCGCCGCCACCGACGTCCCTCTCATTCGTCCCGTCGATTCCTCCACAAATGCCTCTCCTGCCAAGGGAGTCACTGCAATGACAAGGCCCCAATCCAGCCATCCTTTGGACCCTTTAACTGCTGCTGAAATATCTGTGGCCGTGGCAACTGTGAGGGCCGCTGGAGCTACTCCTGAGCTTAGAGATAGTATGCGCTTCATTGAAGTAGTTTTACTGGAGCCCGATAAAAATGTTGTTGCACTAGCAGATGCATATTTCTTTCCACCTTTCCAACCATCATTACTTCCCAGAACTAGAGGAGGACCTCTAATTCCAACTAAACTCCCTCCAAGATGTGCTAGACTTGTTGTTTATAATAAGAAATCTAATGAGACTAGTATATGGATTGTTGAGTTGTCACAAGTACATGCAGTAACTCGAGGTGGCCATCACCGAGGAAAAGTAATTGCTTCACATGTTGTTCCTGATGTTCAACCTCCAATGGATGCTGAGGAATATGCAGAATGTGAGGCTGTAGTCAAAAGTTTTCCCCCATTTATAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTCGATCCCTGGTGTGTTGGTTATTATAGTGAAGCAGATGCTCCTGGGAGACGACTTGCCAAACCCCTCCTATTTTGTCAATCTGAGAGTGACTGCCCCATGGAAAATGGCTACGCCCGCCCAGTTGAGGGCATCTATGTTCTAGTTGATATGCAAAACATGGTGGTGATAGAGTTTGAGGATCGTAAACTAGTTCCCCTTCCACCAGTTGATCCCTTGAGGAATTATACTCCTGGTGAAACCAGAGGTGGCTCTGATAGAAGTGATGTAAAACCGTTGCAAATTATTCAGCCCGAAGGTCCAAGCTTCCGTGTCAATGGGTATTTTGTTGAATGGCAGAAGTGGAATTTTCGTATTGGATTCACACCCAAAGAAGGTTTGGTTATATATTCTGTTGCATATGTTGATGGTAGTCATGGGCGAAGGCCTGTTGCTCATAGGATGAGTTTTGTGGAGATGGTTGTTCCCTATGGAGACCCGAACGAACCACATTATAGGAAAAATGCTTTTGATGCTGGGGAAGACGGCTTGGGAAAAAATGCACATTCCCTCAAGAAGGGATGTGATTGTTTAGGATACATCAAGTATTTTGATGCTCACTTCACTAATTTCACTGGTGGGGTGGAAACAATAGAAAATTGTGTATGTTTACATGAAGAGGATCACGGAATTCTCTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGATCTAGAAGACTTACTGTTTCTTTCATATGTACTGTGGCTAATTACGAGTATGGATTTTTTTGGCACTTTTATCAGGATGGAAGGATTGAAGCTGAAGTCAAGCTAACTGGAATTCTTAGCCTAGGAGCCTTGCTGCCTGGAGAGTTTCGAAAATATGGAACCATGATTGCACCTGGTCTATATGCACCAGTTCATCAGCACTTTTTTGTTGCTCGTATGGACATGTCTGTTGATTCTAAACCAGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATATGAAAGTTGAGGAACCAGGTGAGAATAATGTTCATAACAATGCTTTCTATGCTGAAGAGACTTTGCTCAGATCTGAATTGGAAGCCATGCGTGATTGTAATTCTTTGACTGCTCGACATTGGATTGTAAGGAACACAAGAACATGCAATAGAACTGGCCAGTTGACAGGATACAAGCTGGTTCCTGGCTCGAACTGCTTACCATTGGCAGGCTCGGAAGCCAAGTTTTTAAGACGAGCTGCTTTCTTGAAGCATAATTTTTGGGTAACAACATATTCACGTAATGAGATGTTTCCTGGAGGAGAATTTCCAAATCAAAATCCGCGTGATCGTGAAGGACTAGCTACATGGGTTAAGCAGAACCGATCTTTGGAAGAAACTAATATAGTTCTTTGGTATGTATTTGGAATCACACATGTTCCTCGTTTGGAAGACTGGCCTGTTATGCCAGTAGAGCACATTGGTTTTATGCTCACGCCTCATGGTTTCTTCAATTGTTCCCCTGCAGTAGATGTCCCACCTAATGCATGTGAAATGGATTCTAAAGATAATGAAATTAAGGATAATGGTTCTTCGAAGCCAATTCAGAATGGGTTAACGGCAAAGCTTTAG 2313 0.4475 MASASQKATPPPPPSPSSSCCSAAADSAAIPRAAATPQDWTAATDVPLIRPVDSSTNASPAKGVTAMTRPQSSHPLDPLTAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKNVVALADAYFFPPFQPSLLPRTRGGPLIPTKLPPRCARLVVYNKKSNETSIWIVELSQVHAVTRGGHHRGKVIASHVVPDVQPPMDAEEYAECEAVVKSFPPFIEAMKKRGIEDMDLVMVDPWCVGYYSEADAPGRRLAKPLLFCQSESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTPGETRGGSDRSDVKPLQIIQPEGPSFRVNGYFVEWQKWNFRIGFTPKEGLVIYSVAYVDGSHGRRPVAHRMSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLTVSFICTVANYEYGFFWHFYQDGRIEAEVKLTGILSLGALLPGEFRKYGTMIAPGLYAPVHQHFFVARMDMSVDSKPGEALNQVVEVNMKVEEPGENNVHNNAFYAEETLLRSELEAMRDCNSLTARHWIVRNTRTCNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNFWVTTYSRNEMFPGGEFPNQNPRDREGLATWVKQNRSLEETNIVLWYVFGITHVPRLEDWPVMPVEHIGFMLTPHGFFNCSPAVDVPPNACEMDSKDNEIKDNGSSKPIQNGLTAKL* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1805 770 Gene3D - 203 306 - -
Pvu9g1805 770 Gene3D Copper amine oxidase, catalytic domain 315 741 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pvu9g1805 770 Gene3D - 58 201 - -
Pvu9g1805 770 Pfam Copper amine oxidase, N3 domain 199 302 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pvu9g1805 770 MobiDBLite consensus disorder prediction 50 75 - -
Pvu9g1805 770 PANTHER COPPER AMINE OXIDASE 48 763 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pvu9g1805 770 PANTHER AMINE OXIDASE 48 763 - -
Pvu9g1805 770 SUPERFAMILY Amine oxidase N-terminal region 72 199 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pvu9g1805 770 SUPERFAMILY Amine oxidase catalytic domain 322 741 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pvu9g1805 770 Pfam Copper amine oxidase, enzyme domain 328 736 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pvu9g1805 770 MobiDBLite consensus disorder prediction 749 770 - -
Pvu9g1805 770 SUPERFAMILY Amine oxidase N-terminal region 198 316 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pvu9g1805 770 MobiDBLite consensus disorder prediction 1 76 - -
Pvu9g1805 770 Pfam Copper amine oxidase, N2 domain 74 161 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1805 Pvu-Chr9 25387068 25394742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1805 K00276 - gmx:100798722 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1805 9 25387068 25394742 Pvu9g1805 9 25387068 25394742 ECH
Pvu3g2106 3 41853814 41866530 Pvu9g1805 9 25387068 25394742 PCT