Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1803 ATGGAATCCAAACCCAGTCAAAGTATCAAGCTCCTCTGTAGCTACGGCGGCAAAATACGCCCGCGCACCACGGACGGCGAACTACGTTACGTTGGCGGCCACACCAGAGTACTCAACGTCCACCGTTCGATCTTCTTTTCAGAATTGATGGTGAAACTTAGCCAGTTTTGTGGTTCGTCTGTGATCTTGAGATGTCAGTTACCCAAGGGAGACTTGGAGACCTTGATTTCCATCACCAACGATGAAGATCTCTCTAACATAATCGAAGAATACGATCGTGCATCGTTGAAGCTGGCGCATCCGATGAAGATCAGAGCCGTCCTCTTGCCGCCGAAGTCGGAGAAAAAGATTTTGTCTGCTCCGTCGTTGTCCTCGGCGTCGTCCAGCGCCAGCCACTCTCCGGCCAGATCGCCTCACACATCCGCCGAATCCTTGCCGTACGCGGCGGCGTACCGCCACGGATGCAATTACCGGACACCGCCGCTGCCGTCTGCGTATGCTATTGGCATGCGTAACGGCTCGGCGAAGGCCTGTTGCTACACACAGTTCGATGGAAGCCCCAGATTTTGGCGTCGTGGACCTCATTGCTATAATTACTGTCATTGA 606 0.5363 MESKPSQSIKLLCSYGGKIRPRTTDGELRYVGGHTRVLNVHRSIFFSELMVKLSQFCGSSVILRCQLPKGDLETLISITNDEDLSNIIEEYDRASLKLAHPMKIRAVLLPPKSEKKILSAPSLSSASSSASHSPARSPHTSAESLPYAAAYRHGCNYRTPPLPSAYAIGMRNGSAKACCYTQFDGSPRFWRRGPHCYNYCH* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1803 201 PANTHER PB1 DOMAIN PROTEIN 1 201 - -
Pvu9g1803 201 CDD PB1_UP2 12 108 - -
Pvu9g1803 201 SMART PB1_new 23 111 IPR000270 GO:0005515
Pvu9g1803 201 PANTHER OS05G0427100 PROTEIN-RELATED 1 201 - -
Pvu9g1803 201 MobiDBLite consensus disorder prediction 120 141 - -
Pvu9g1803 201 SUPERFAMILY CAD & PB1 domains 25 115 - -
Pvu9g1803 201 Gene3D - 29 108 - -
Pvu9g1803 201 MobiDBLite consensus disorder prediction 120 140 - -
Pvu9g1803 201 Pfam PB1 domain 25 97 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1803 Pvu-Chr9 25356687 25357655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1803 9 93 MAP Kinase Kinase Kinase AT5G57610 47.059 1.54e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1803 - - vra:106761207 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1803 9 25356687 25357655 Pvu9g1803 9 25356687 25357655 ECH
Pvu3g2112 3 41954360 41955579 Pvu9g1803 9 25356687 25357655 PCT