Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1797 AACTTGCTGTTGACTGAAGACCAGAAAACAGTCATGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCATTAACCGAGATGATGACTGCTGAAACAGGAACCTACCGCTGGATGGCTCCAGAGTTGTATAGTACTGTTACATTGAGGCAAGGGGAGAAAAAGCATTACAACCATAAAGTTGATGCTTATAGTTTTGCAATTGTGTTGTGGGAGCTCTTACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTTCAAGCTGCATATGCTGCAGCCTTTAAGAATGTAAGGCCAAGTGCAGAGAATCTTCCTGAGGAACTGGCTCTAATTCTTACTTCATGCTGGCAAGAGGACCCAAATGCCAGACCCAACTTCACCCAGATAATCCAAATGCTCCTAAATTATCTTTACACTGTTGCACCTTCTGAACCCATGATTCCTTCAAGAATATTCAGTTCTGAGAACACTGTCTTGCCGCCAGAGTCTCCCGGAACTAGCTCCTTAATGGCAAAACGTGATGACACAGGCGATACACCAAGAGCAAAGGACGAAGTCAAGCCTAATGGTTTTCTTTGCTGCTTTAGTCAGTGTTATTAA 597 0.4305 NLLLTEDQKTVMLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEELALILTSCWQEDPNARPNFTQIIQMLLNYLYTVAPSEPMIPSRIFSSENTVLPPESPGTSSLMAKRDDTGDTPRAKDEVKPNGFLCCFSQCY* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1797 198 MobiDBLite consensus disorder prediction 154 182 - -
Pvu9g1797 198 PANTHER SERINE-THREONINE PROTEIN KINASE 1 173 - -
Pvu9g1797 198 Gene3D Transferase(Phosphotransferase) domain 1 1 145 - -
Pvu9g1797 198 SUPERFAMILY Protein kinase-like (PK-like) 1 161 IPR011009 -
Pvu9g1797 198 ProSiteProfiles Protein kinase domain profile. 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1797 198 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 173 - -
Pvu9g1797 198 Pfam Protein tyrosine and serine/threonine kinase 1 132 IPR001245 GO:0004672|GO:0006468
Pvu9g1797 198 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1797 Pvu-Chr9 25307939 25308910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1797 1 198 MAP Kinase Kinase Kinase AT5G50180 79.798 7.70e-116 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pvu9g1797 PK_Tyr_Ser-Thr 1.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1797 - - pvu:PHAVU_009G1741001 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1797 9 25307939 25308910 Pvu9g1797 9 25307939 25308910 ECH