Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1787 ATGCCGACGGATTCCTCGGAGCAAGACCTCGACGATCCTGACATCGAATTCGTCGAGGTTGATCCCTCTGGTCGTTATGGTCGGTACAAGGAAGTTTTAGGGAAAGGGGCTTTCAAGAAAGTATATCGAGCGTTTGATGAATTGGAAGGTATTGAAGTGGCTTGGAATCAGATTAAGCTGGCGGATGTGTTGCGTAACTCGGAAGATTTCGAGCGACTTTATTCGGAGGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATAATTAAGTTTTACAACTCATGGATTGACTCCAAGAGCGAGAACGTCAACTTCATTACTGAAATTTTCACCTCAGGAACGTTGCGCCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCAGTGAAGAAATGGTCTAAGCAGATTCTGGAAGGCCTTTTCTATCTTCACAGTAATAATCCTCCGATCATTCATCGTGATCTGAAGTGTGATAACATTTTTGTCAATGGGAATCAAGGGGAGGTAAAAATTGGTGATTTAGGATTGGCGGCTATCCTCCAGCAGGCCAATTCAGCTCATAGTGTCATAGGAACTCCGGAGTTCATGGCCCCAGAACTTTACGAAGAGGAATACAACGAGCTTGTTGACATCTATGCTTTTGGTATGTGCTTGCTAGAGTTGGTAACAGTTGAGTACCCGTATGTTGAATGTGCCAATGCTGCCCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCGTTGGCAAAAGTGATAGATCCTGAAGTTAAAGCATTTATTGAAAAGTGTATTGCTCATGTATCTGAGCGCTTGTCTGCGAAGGACCTCTTGACGGATCCCTTCCTTCAGTCAGATTATGATAATGAAAGTGTAGGCCGATCTTCAAGATCTCAAACCCATCATTCAGGAAATGTTTCTCATAATCAAGCTATTGCTGTGGATACTTCTACAGAGGCAAGTAGGGAATTCACAGTGGAAGGTCAGAGGAGAGATGATAATACAATATTTTTAAAATTGAGAATTGCAGATTCCTCAGGTCATATTCGCAATATCCACTTTCCTTTTGATACTGAAGCAGACACTTCAACCTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTTACTGATCAAGATGTTACAACTATTGCTAGGATGATTGACTCTGAAATTCGGTATCACATTCCTAGCTGGAATGTTAGTGAAATTCCTGTTGACAGTTATAGTCAAGATTCAGGCTATACCTCTGAAAGTAAGCCAGAGGCCTCTCCTATGAAACTCGATTCCATTTCTTCTCCTGGCAGTCTCGCATTAGAAGTATTACCTTCAGGTCGAAAGTTCTGGTCGGACTCACCAAGGGGAGTTGGTGGAAACTCTCCATTTCGTGCTGGTAGTTCAAAATTTGGTTTTGCTGCAGATGCAAACGCTGAGGAAGGCAGCCTGGCCTCGAATGGTGATATTTCAGCTGATGATCGTGTTGGTGATTGTAGTGATGAGATTGTTGATTCCCCTTCCAGTGAGAGAAGTATTAAATCAGGAGCAATCGGTGAAAAAGGTCCTCTGAAAAAAATATCTGGAAGCGTGAAAGATTCGGAAACAGAATACATCAATTTCATGGCAGCAAAACTGGAGAAGTTGTTGGATAAACAAAGAGAGGAGTTAGATGAACTAAAGAGGAAGCACGAATTAGCTGTCTCGGATCTTTTGAAGGAACTTTCTCCAGAAATTAGCCAGAAGGTTCTAAGTATATGCAACCTAGAGATGCCTCGCAGTGAAATGTAG 1791 0.4204 MPTDSSEQDLDDPDIEFVEVDPSGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIKLADVLRNSEDFERLYSEVHLLKTLKHKNIIKFYNSWIDSKSENVNFITEIFTSGTLRQYRKKHKHVDLRAVKKWSKQILEGLFYLHSNNPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVIDPEVKAFIEKCIAHVSERLSAKDLLTDPFLQSDYDNESVGRSSRSQTHHSGNVSHNQAIAVDTSTEASREFTVEGQRRDDNTIFLKLRIADSSGHIRNIHFPFDTEADTSTSVASEMVEELELTDQDVTTIARMIDSEIRYHIPSWNVSEIPVDSYSQDSGYTSESKPEASPMKLDSISSPGSLALEVLPSGRKFWSDSPRGVGGNSPFRAGSSKFGFAADANAEEGSLASNGDISADDRVGDCSDEIVDSPSSERSIKSGAIGEKGPLKKISGSVKDSETEYINFMAAKLEKLLDKQREELDELKRKHELAVSDLLKELSPEISQKVLSICNLEMPRSEM* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1787 596 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 340 394 IPR024678 GO:0004674|GO:0005524
Pvu9g1787 596 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Pvu9g1787 596 MobiDBLite consensus disorder prediction 412 432 - -
Pvu9g1787 596 Gene3D - 336 422 - -
Pvu9g1787 596 Coils Coil 543 574 - -
Pvu9g1787 596 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 592 - -
Pvu9g1787 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Pvu9g1787 596 CDD STKc_WNK 25 285 - -
Pvu9g1787 596 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Pvu9g1787 596 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Pvu9g1787 596 MobiDBLite consensus disorder prediction 291 329 - -
Pvu9g1787 596 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1787 596 MobiDBLite consensus disorder prediction 291 325 - -
Pvu9g1787 596 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1787 596 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 592 - -
Pvu9g1787 596 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1787 Pvu-Chr9 25205464 25209436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1787 103 584 MAP Kinase Kinase Kinase AT3G48260 54.865 6.12e-169 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu9g1787 Pkinase 7.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1787 K08867 - gmx:100272204 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1787 9 25205464 25209436 Pvu9g1787 9 25205464 25209436 ECH