Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g1781 | ATGGGTTACGAAGACAATCCGTATCGCGACGAGGACGGTGAGCCCTTGATGGACTACGACGACGTTCAATCCGACCGCGAGCCCTCCCCGGAGCCGCGTCACCAGCTCGACGATTACGAGGACGATGTCAACGACGAGTGGCGCGGCCGGGATCGGTCGCAGACGCCGGTGTACGACAACGATGCAGCGCGATCGAAGCCGCGGAAGAGGCTGATCAAGAAGAGCGTCGCTGGGAAGCAGTCGGTGGCGGCGGAGCTCGAGGATGAGGAGGAGGAGGGGTATGTTCCAGAGGCGAGGTTTGACGAGGAAGATGGAAGAAAGAGGAAGAAGGGAAAGGAAGTTGGGAGTGGGAAGAAGGAGAAAAGGCTGAAGGGGGAACAGAGGTTCGGTAGTGGCGATGGATCCAAATTTGGGGGTTCGAAAAAAGGTTTTGGTGGTAAGGCTGGGAAGGATCATGATGGTGAAGTTAAGGAGATGTGGGATACAATTGCTGGGGGAGATTCTGAGGATGATCACGATGGTGTCAGGGATCTGGATGATGACAACTTTATAGATGACACTGGAGTGGAACCTGCTTATTATGGTAGTGATGAACCACGTTCTCCTGGTGATGCTCCTCAGGCAGAAGAAGGTGAAGAGGATTCAGAAATGAAGGATCTTTTTAAAATAGGGAAGAAAAGGAAGAAGAACGAGAGAAGTCCTGCTGAAATAGCATTACTAGTGGAGAATGTCATGGCTGAGCTTGAGGTTACAGCTGAAGAGGATGCTGATCTTAATAGACAGGGGAAACCTGCTATTAATAAACTCAAGAAACTGACTCTTCTCACAGAAGTCCTCTCGAAAAAACAACTTCAATTAGAGTTTTTAGATCATGGAGTTCTAACATTATTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGTTTGCCTAATATAAATATACGCATGGAAATATTGAGGATTTTGAATGAGTTTCCTATAGACCTAGAGCAGTACGATAGGAGAGAACAACTGAAAAAGAGTGGCCTTGGAAAGGTGATTATGTTTTTATCAAAATCTGACGAAGAAATCAGTGTAAATAGAAAACTAGCCAAGGAGTTGGTTGACAAGTGGAGCCGGCCTATATTTAATAAGAGTACCCGATTTGAAGACATGAGAAATGTAGAAGATGATAGGGTTACTTATAGGAGACCATCTGTTAAAAAGCCAACTAATAAAGTTGCAGGAATATCGAGAGATAGTGATCTTGATTTGGAAATTTCACAGCCTACTACGGCTGGACAATCTTCTTCTAGGCAGCATGCTTCGAGGCCGGAAGCAACACCTTTAGATTTTGTTATACGACCCCAATCTAAAATTGATCCCGACGAGATTAGAGCCCGGGCAAAGCAAGCTGCCCAAGATCAACAGCGTATGAAGATGAATAAGAAATTGCAGCAATTGAGGGCACCAAAAAAGAGGCAGCTCCAGGCTACAAAACTGAGTGTGGAAGGTCGTGGTATGGTCAAATATTTGTAA | 1518 | 0.4605 | MGYEDNPYRDEDGEPLMDYDDVQSDREPSPEPRHQLDDYEDDVNDEWRGRDRSQTPVYDNDAARSKPRKRLIKKSVAGKQSVAAELEDEEEEGYVPEARFDEEDGRKRKKGKEVGSGKKEKRLKGEQRFGSGDGSKFGGSKKGFGGKAGKDHDGEVKEMWDTIAGGDSEDDHDGVRDLDDDNFIDDTGVEPAYYGSDEPRSPGDAPQAEEGEEDSEMKDLFKIGKKRKKNERSPAEIALLVENVMAELEVTAEEDADLNRQGKPAINKLKKLTLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRMEILRILNEFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEISVNRKLAKELVDKWSRPIFNKSTRFEDMRNVEDDRVTYRRPSVKKPTNKVAGISRDSDLDLEISQPTTAGQSSSRQHASRPEATPLDFVIRPQSKIDPDEIRARAKQAAQDQQRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMVKYL* | 506 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g1781 | 505 | MobiDBLite | consensus disorder prediction | 99 | 129 | - | - | |
Pvu9g1781 | 505 | MobiDBLite | consensus disorder prediction | 417 | 437 | - | - | |
Pvu9g1781 | 505 | ProSiteProfiles | TFIIS N-terminal domain profile. | 295 | 378 | IPR017923 | - | |
Pvu9g1781 | 505 | MobiDBLite | consensus disorder prediction | 463 | 490 | - | - | |
Pvu9g1781 | 505 | PANTHER | PROTEIN IWS1 HOMOLOG 1 | 1 | 505 | IPR044204 | GO:0009742|GO:0032784 | |
Pvu9g1781 | 505 | MobiDBLite | consensus disorder prediction | 145 | 182 | - | - | |
Pvu9g1781 | 505 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 290 | 378 | IPR035441 | - | |
Pvu9g1781 | 505 | MobiDBLite | consensus disorder prediction | 1 | 216 | - | - | |
Pvu9g1781 | 505 | MobiDBLite | consensus disorder prediction | 394 | 448 | - | - | |
Pvu9g1781 | 505 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 234 | 381 | IPR035441 | - | |
Pvu9g1781 | 505 | PANTHER | PROTEIN IWS1 HOMOLOG 1 | 1 | 505 | - | - | |
Pvu9g1781 | 505 | Pfam | TFIIS helical bundle-like domain | 322 | 375 | IPR017923 | - | |
Pvu9g1781 | 505 | MobiDBLite | consensus disorder prediction | 1 | 66 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g1781 | Pvu-Chr9 | 25136997 | 25140379 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Pvu9g1781 | Med26 | 2.5e-13 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g1781 | K17498 | - | gmx:100801805 | 818.92 |