Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1768 ATGGTTGTGAAAAGTGGGTTATTTGTTCTATCACTGTTTTTGTTCTTAATCTCCATCGACGCGAAGCTTGAACTCTACCCCGCAGATTTCAAGGCACTATTGGCTCTGCGAAAGGACCTCGGAGTCAACGGTGAACTGGAGGCAAATGAGGCATGTTACTCGGAGGGTGTGTTCTGCGAGCGAAGGCTCTCGACCAAGGAAACCTACGTGCTCCGAATCACGAGGTTGGTGCTGAAATCCAAGCATCTCAACGGTGTCTTGTCCCCCGCAATAGGACGCCTCACAGAGCTCAAACAACTCTCTCTCTCCCACAACCAACTCGTTGACCGCATCCCTCCCCAAATCGTTGACTGCCGCAAGCTCGAATTCCTTGACCTCTCCAACAACCTCTTCTCCGGCGAGGTCCCCTCCGAACTCTCCTCTCTCACGCGCCTCCGCGCGTTGGACATCTCCTCCAACAAACTCTCCGGCAACCTCAACTTCCTCAAGTACTTCCCCAACCTCGAAACCCTCTCCGTCGCCGACAACTTCTTCACCGGAAGGGTGCCTTCTTCCGTCCGCTCCTTCCGCAACCTCCGCCAATTTAACTTCTCCGGCAACAGCTTCCTCGAACCCTCTCTCCGCTTCCAACATTCCTCCTCGTCAGACACCGTTCTCTCCAGACGTTACCTTTTGGACGGTGGTGATGCACCTTCTCCTGCGCCTGCCTCAGACAAGAGAAACTCCCAAGCTTCCAATGTTTCCCCTACAGAGGCACCTGGTCCTTCCCCTAACCACCGAAAACCCAAGCACAGTAAGAGAAAACTCGCAGGGTGGATTCTCGGGTTTGTGGCAGGGGCACTGGCGGGAACCTTATCAGGGTTCGTATTTTCTCTGTTGTTCAAGCTGGCTTTGGCGTTGATCAAAGGAAGAGGAAAGAGAGCGGGTCCTGATATTTTTAGTCCCTTGATTAAGAAAGCAGAGGATTTGGCCTTCTTGGAGAAAGAAGAAGGGCTCGCTTCGATGGAAATCATTGGACGCGGTGGCTGTGGAGAGGTTTACAAGGCTGAGTTACCAGGAAGCGGTGGCAAAATGATTGCTATAAAGAAAGTGATTCAACCTCCCAAAGATGCTGCTGAATTGGCAGAGGAAGATAGTAAGATTATGCATAAGAAAATGAGGCAAATTCGGTCTGAGATTACAACTGTGGGACAGATTAGACACCGAAACCTTCTGCCTCTGTTAGCGCATGTTTCTAGGCCTGATTGCCACTACCTAGTGTATGAATTCATGAAAAATGGTAGCTTGTTGGACTTGCTGGACAAGGTTCAAAAGGGTGAGGGAGAGTTGGATTGGTTGGCGCGGCATAGAATCATGCTTGGTGTTGCTGCTGGACTTGAATACCTTCACATGAGTCACAACCCTCGCATCATTCATAGGGATCTCAAGCCTGGAAATATTCTTCTCGATGATGACATGGAAGCGCGCATAGCTGATTTTGGACTGGCTAAGGCAATGCCGGATTATAAGACTCACATAACCACCTCCAATGTTGCTGGCACTGTGGGGTACATTGCTCCTGAGTATCACCAGATACTTAAGTTCACTGATAAATGTGATATCTACAGCTTTGGGGTTATCCTTGGGGTGTTGGTGATTGGGAAGCTTCCTTCCGATGAGTTCTTTCAGCATACTGAAGAGATTAGTTTGGTCAAGTGGTTGAGGAAGGTTTTGAGTTCTGAGAATCCCAAGGAGGCTATTGATACAAAGCTGCTCGGAAATGGGTATGAGGAGCAGATGCTTCTGGTTTTGAAGATTGCATGCTTTTGCACCATGGATGATCCCAAGGAGAGGCCTAACAGCAAGGAAGTTAGGTGCATGCTGTCTCAGATCAAACACTGA 1881 0.4944 MVVKSGLFVLSLFLFLISIDAKLELYPADFKALLALRKDLGVNGELEANEACYSEGVFCERRLSTKETYVLRITRLVLKSKHLNGVLSPAIGRLTELKQLSLSHNQLVDRIPPQIVDCRKLEFLDLSNNLFSGEVPSELSSLTRLRALDISSNKLSGNLNFLKYFPNLETLSVADNFFTGRVPSSVRSFRNLRQFNFSGNSFLEPSLRFQHSSSSDTVLSRRYLLDGGDAPSPAPASDKRNSQASNVSPTEAPGPSPNHRKPKHSKRKLAGWILGFVAGALAGTLSGFVFSLLFKLALALIKGRGKRAGPDIFSPLIKKAEDLAFLEKEEGLASMEIIGRGGCGEVYKAELPGSGGKMIAIKKVIQPPKDAAELAEEDSKIMHKKMRQIRSEITTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLLDLLDKVQKGEGELDWLARHRIMLGVAAGLEYLHMSHNPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTEEISLVKWLRKVLSSENPKEAIDTKLLGNGYEEQMLLVLKIACFCTMDDPKERPNSKEVRCMLSQIKH* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1768 626 Gene3D Ribonuclease Inhibitor 26 227 IPR032675 -
Pvu9g1768 626 SMART serkin_6 332 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1768 626 Gene3D Transferase(Phosphotransferase) domain 1 424 626 - -
Pvu9g1768 626 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Pvu9g1768 626 Pfam Protein kinase domain 335 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1768 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Pvu9g1768 626 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 626 - -
Pvu9g1768 626 SUPERFAMILY RNI-like 72 470 - -
Pvu9g1768 626 MobiDBLite consensus disorder prediction 236 253 - -
Pvu9g1768 626 MobiDBLite consensus disorder prediction 229 264 - -
Pvu9g1768 626 SUPERFAMILY Protein kinase-like (PK-like) 330 621 IPR011009 -
Pvu9g1768 626 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 6 626 - -
Pvu9g1768 626 ProSiteProfiles Protein kinase domain profile. 332 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1768 626 Gene3D Phosphorylase Kinase; domain 1 322 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1768 Pvu-Chr9 24992107 24994466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1768 7 626 Receptor kinase-like Gene Family AT2G31880 63.823 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Pvu9g1768 Pkinase 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1768 - - gmx:100811980 1026.16