Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1762 ATGGATGCCCCAACCCTCCTCTTTTCCGAACCCGATCTCTATTTACAAACTCCCGCTGGCAACCGCATTCCAGCGCACGCTACCATTCTGGCTTCTGCATCCCCGGTTCTACAAAACGTCATAAAATCCTCCAACCGAATCGTTAAAATCCACGGCGTTCCAGACGCCGCCGTCACGGCCTTCGTAGCGTTCCTCTACTCCGCCAGATGCACGGAGGAAGATATGGACAAGTACGGAATGCACCTTCTGGCACTGTCGCACGTGTACATGTTGAAGCAGCTGAAGCAGCGGTGCATCAAGGGACTGGGCGACCGCGCCAGTACGGAGAACGTAGTGGACGTGTTGCAACTGGCGCGGCTCTGCGACGCACCGGATCTCTACCTCAAGTGCGTCAAGTACCTCACCAACCGTTTCAAAGCGGTGAAGGAAACCGAGGGATGGAGATTCTTGCAGAACCACGACCCCTGCCTTGAACTTGAGATTCTCCGATTCATGGAAGAAGATGAAAAGAGGAAGAGGAAGACGAGGAAGAGGAGGGAGGATGGAAGGTTGTACACGGAACTGAGCGAGGCGATGGTATGTCTGGAGCACATATGCACGGAAGGGTGCACGGAGGTAGGGCCGTTGGAAGTGGAGGTTGGGCGAGGGAGAGAACCGTGCTCAAAGTTCGGCACGTGTCAGGGTCTGCAAAATTTGATTCGACACTTTGTGACTTGCGAGAGGGTTAAGGGACGGTGTTTGCCGTGTAAGCGTATGTGGCAACTCTTCAAACTCGACTCCTCCATTTGCCTGCGACACGATTCCTGCAAGGTTCCTCTCTGCAGGAAAATTAGATTAAGAATGGAGGAAGAGAAGAAGAAAGGTGACGCAAGGTGGGAAGTACTAGTGAGGAAGGTGGCCTCTGCCAAAGCCATGTCTTTCTTGGCACTGCCAAAGAGGAAGAGGGTTGAGGAAATTAGAGGAGAGGGACAATAA 975 0.5313 MDAPTLLFSEPDLYLQTPAGNRIPAHATILASASPVLQNVIKSSNRIVKIHGVPDAAVTAFVAFLYSARCTEEDMDKYGMHLLALSHVYMLKQLKQRCIKGLGDRASTENVVDVLQLARLCDAPDLYLKCVKYLTNRFKAVKETEGWRFLQNHDPCLELEILRFMEEDEKRKRKTRKRREDGRLYTELSEAMVCLEHICTEGCTEVGPLEVEVGRGREPCSKFGTCQGLQNLIRHFVTCERVKGRCLPCKRMWQLFKLDSSICLRHDSCKVPLCRKIRLRMEEEKKKGDARWEVLVRKVASAKAMSFLALPKRKRVEEIRGEGQ* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1762 324 Pfam BTB/POZ domain 11 100 IPR000210 GO:0005515
Pvu9g1762 324 SUPERFAMILY POZ domain 12 102 IPR011333 -
Pvu9g1762 324 CDD BACK 107 150 - -
Pvu9g1762 324 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 6 320 - -
Pvu9g1762 324 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 6 320 IPR044513 -
Pvu9g1762 324 Gene3D Potassium Channel Kv1.1; Chain A 8 101 IPR011333 -
Pvu9g1762 324 SMART TAZ_2 182 275 IPR000197 -
Pvu9g1762 324 Gene3D - 106 178 - -
Pvu9g1762 324 SUPERFAMILY TAZ domain 182 282 IPR035898 -
Pvu9g1762 324 Pfam TAZ zinc finger 189 274 IPR000197 -
Pvu9g1762 324 Gene3D TAZ domain 179 310 IPR035898 -
Pvu9g1762 324 ProSiteProfiles BTB domain profile. 11 74 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1762 Pvu-Chr9 24939116 24941904 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pvu9g1762 BTB 3e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1762 - - pvu:PHAVU_009G170600g 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1762 9 24939116 24941904 Pvu9g1762 9 24939116 24941904 ECH
Pvu3g2139 3 42156613 42160390 Pvu9g1762 9 24939116 24941904 PCT