Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1760 ATGATGATGGAAGGGCGGCGGCATTCAGTTGATATTCCAATTTCTAAAACTCTTGTGGCATTGAGGAGAGTCAGGTCATTGAGGGATCCTTCAACTAATTCTATGAGCAAACTCTCTTCTTTGGTTGATAATGTGCACTGGGAAAACGGTTCTGCTAATGAGATTTCCCTGCGGTTTTCTGATGCTGCACGGCCACGTGATTCTGATGACAATGCTGCTCTCAGATCAAGAATTTTAGGTTTCAAGGGACAATGGGAGCAGAATGATGCTGATTTTGTATTCAACTCAAGGTTGAAGCCTAGTGGAATTTCTTGTCAGGGTGTCCAACAAGATGGTGAACTAGTTTACTCTAAGCGTAAAAGTGAAAGCTGTGGTAGCAACCATGGGAGTAAAGAATTGGACTTGGCTCGTATTGTGCTTCCAAGTAACAATGATTTCAAGGATGGGGATTCATGTTATATAGCAACTGCTAGATCATCTCAATTAGGGAGATTAGATTGCTCTAAGTCAGCAAAAAAGTCTCTGCGCAAGAATAAAGTAAAACCATCAGAGTTAGTAGGCAGTACTGATGATGGCAATGCTAGTCCATACCCTTCTGGTTATGATGCTTTCTCACCCTACAGTGGTTCAGTAGGTATAAATCAAGATATGGATGGTTTAGATAATAATGATAACGGGTGTGGAATAAGCTGCTGTTGGTCAAGATCACCAAGATTTAGAGAATCAAATCTATATGGTGAGATAGAAGACCGTCCTTTGATATCTCAGCGAGTTGACGAGTCAGATCTTCATTCACACAGAAGCATGAGACACAATGGTGGTGGGATTAGTCTGAATTTGGAAACTCCTAGGAGTTTGTCCATGAAATTTAGGCCTAAATCATTTAGTGATTTGGTGGGACAAAATGTGGTAGTGAGGTCTTTGTTGGGGGCTATCTCCAGAGGAAGAATAACATCATTTTACCTCTTCTATGGTCCGCGTGGCACCGGCAAGACATCTGCATCTAGGATATTTGCTGCTGCACTGAATTGCCTTTCTTTTGAGGAGCAGAGGCCATGTGGCCTATGCAGAGAATGTATTATATTCTTTTCTGGAAGAAGTAAAGATGTTAAGGAAGTGGATTCTGTGAGAATCAATCGCACCGACCAGGTTAAATCCCTTGTTAAGAGTTCAAGCATCCCTCCAGTCTCTTCGCGTTTCAAGGTTTTCATTGTTGATGAGTGCCAGCTATTGAACGGGGAGACATGGGCAAGCATTTCAAATAGTCTAGAGAACCTTTCTCAACATGTTGTTTTTGTGATGATCACTCCTGATTTGGATAAGCTTCCTCGGACTGTGGTTTCCCGTGCCCAGAGGTATCACTTTCCAAAGGTTAAAGACGCTGACATTGTATGCAGATTACAAAATATTTGCGCCGAAGAAAGTCTTGATTTTGAACAGGAAGCTTTGGACTTTATTGCTGCAAAATCCTGTGGGTCTGTTAGGGATGCAGAAATGATGCTTGATCAGATGAGTTTGCTTGGTAAAAAGATCAATATTTCTTTAGCTTATGAACTTACTGGGATCGTTTCTGATGATGAATTACTAGATTTGCTGGATCTAGCTTTTTCATCCGACACTTCAAATACAGTCATTAGAGCTCGGGAGCTGATGAGATCAAGGATAGATCCTTTGCAACTTGTATCACAACTAGCAAATCTCATTATGGACATACTTGCAGGGAAATGCGAAAATAGTGGTTCAGAAGTCAGAAGTAGATTTTACAGGAAATATACCTCGGAAGCTGATCTGCAGAAACTAAACAATGCATTGAAAATACTTTCTGAAACTGAGAAGCAGTTGAGAATTTCGAAGAATCAAACAACATGGTTCACCGTAGCTCTCCTACAGTTAAGCTCTGTAGATTATCAATCTGTGGATGCAAATGACACCAAATTTAGTCTTAGAGGTCAAAACTTGGAGCATTTTGCAACAGGCCTGTGTGCTAACAAGTCATACAGATTAGAAGTGCCGGAGGATCACAAAGGAACATTGGATTCCATTTGGTATAAAGCCACTCAGATGTGTCATTCTAGTCAGCTCAAAACTTTTCTCAGGAAGAAGGGGAAGTTGTCGTCACTTCATGTTGATCGCAGTACAGCTTGTCTTGCTATAGCCGAGTTGGAGTTCCACCATAGCCACCATGTATCCAAGGCCGAGAAGTCATGGAAAATGATTGCAAGCTCCTTGCAATTCATATTGGGTTGCAATGTGGAGTTGAGGATCACTTATACACCTTGTGCTTCAGATTCTAAGTATTCCAAATTGAAGAGATCAACTTTCAGTATCTTCACTTGTTCCCGCAGAAATCGGCAACAGAAGTCAGCATCATCTAATGAACAAGGAAGTGAATCAGATTGTGCTGATTGCACCTCTGAAAATCCCATGATGAAGGACAAAACTTCTACCTCTGATTGTGGAATGGATGCTGTAACAGCTTTGAGGAGTTGTGAAGGGAACTTGCTGAGCTCAGGAGAAAGATTTTTGAATAGATCATTTCAAGAGAGTATGAGAACATCATGTGCTGAAGTGGATTCTTCCAAGGAAAAGGGATGCAACGGTGCTCATCTAGATCCATCAATCCTCGATTCAGATAATGAACACTTTAACTGTTTTCCTAAAACCCTTTGGCTTCAAAAGAAGTTCCGTTCTTCGTATTCATCCAAGTTTACTTTTCAAGGCATTCAACAACAGAAAGATTTTGTTTTATCTGTCCCGAAGTGTACATGTTCTGGGACATATACATATGCTAATGAACCCTGCATTTTTTCCGGTACTTGTAAGAATTGCACCAAAGCCTCTTAG 2844 0.4096 MMMEGRRHSVDIPISKTLVALRRVRSLRDPSTNSMSKLSSLVDNVHWENGSANEISLRFSDAARPRDSDDNAALRSRILGFKGQWEQNDADFVFNSRLKPSGISCQGVQQDGELVYSKRKSESCGSNHGSKELDLARIVLPSNNDFKDGDSCYIATARSSQLGRLDCSKSAKKSLRKNKVKPSELVGSTDDGNASPYPSGYDAFSPYSGSVGINQDMDGLDNNDNGCGISCCWSRSPRFRESNLYGEIEDRPLISQRVDESDLHSHRSMRHNGGGISLNLETPRSLSMKFRPKSFSDLVGQNVVVRSLLGAISRGRITSFYLFYGPRGTGKTSASRIFAAALNCLSFEEQRPCGLCRECIIFFSGRSKDVKEVDSVRINRTDQVKSLVKSSSIPPVSSRFKVFIVDECQLLNGETWASISNSLENLSQHVVFVMITPDLDKLPRTVVSRAQRYHFPKVKDADIVCRLQNICAEESLDFEQEALDFIAAKSCGSVRDAEMMLDQMSLLGKKINISLAYELTGIVSDDELLDLLDLAFSSDTSNTVIRARELMRSRIDPLQLVSQLANLIMDILAGKCENSGSEVRSRFYRKYTSEADLQKLNNALKILSETEKQLRISKNQTTWFTVALLQLSSVDYQSVDANDTKFSLRGQNLEHFATGLCANKSYRLEVPEDHKGTLDSIWYKATQMCHSSQLKTFLRKKGKLSSLHVDRSTACLAIAELEFHHSHHVSKAEKSWKMIASSLQFILGCNVELRITYTPCASDSKYSKLKRSTFSIFTCSRRNRQQKSASSNEQGSESDCADCTSENPMMKDKTSTSDCGMDAVTALRSCEGNLLSSGERFLNRSFQESMRTSCAEVDSSKEKGCNGAHLDPSILDSDNEHFNCFPKTLWLQKKFRSSYSSKFTFQGIQQQKDFVLSVPKCTCSGTYTYANEPCIFSGTCKNCTKAS* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1760 947 Gene3D - 522 635 - -
Pvu9g1760 947 Coils Coil 597 620 - -
Pvu9g1760 947 MobiDBLite consensus disorder prediction 178 198 - -
Pvu9g1760 947 Gene3D - 279 456 IPR027417 -
Pvu9g1760 947 Gene3D - 459 521 - -
Pvu9g1760 947 CDD HLD_clamp_pol_III_gamma_tau 458 521 IPR045085 -
Pvu9g1760 947 CDD AAA 299 449 - -
Pvu9g1760 947 SMART AAA_5 317 460 IPR003593 -
Pvu9g1760 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 287 507 IPR027417 -
Pvu9g1760 947 Pfam DNA polymerase III, delta subunit 301 458 - -
Pvu9g1760 947 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 109 926 - -
Pvu9g1760 947 SUPERFAMILY post-AAA+ oligomerization domain-like 522 632 IPR008921 GO:0003677|GO:0006260
Pvu9g1760 947 PANTHER DNA POLYMERASE III SUBUNIT GAMMA/TAU 109 926 - -
Pvu9g1760 947 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 285 631 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1760 Pvu-Chr9 24877107 24881984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1760 289 614 Core DNA Replication Machinery Family AT1G21690 25.758 2.07e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1760 - - gmx:100812040 1545.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1760 9 24877107 24881984 Pvu9g1760 9 24877107 24881984 ECH
Pvu3g2141 3 42212335 42217831 Pvu9g1760 9 24877107 24881984 PCT