Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1745 ATGGCGGCGGTGGCGGAGGCGAGGAAGGCTCCACGGCCGGGCAAGGGCGGCTACGAAGCACACGGCCTGAGCGAGGAAGAAGCGCGTGTTCGAGCAATCGCGGAGATCGTGAACTCCATGGTGGACCTCTCTCACAAAGGCCAGAACGTGGACCTCAACGCGCTCAAGTCCGCAGCGTGCCGCAAGTACGGCCTTGCACGCGCACCTAAGCTCGTGGAGATGATAGCCGCGCTCCCCGACGCGGAGCGCGAAACACTCCTCCCCAAGCTCCGCGCCAAGCCCGTCCGCACCGCCTCCGGAATCGCCGTAGTTGCCGTCATGTCCAAACCGCATCGCTGCCCGCACATCGCTACCACCGGGAACATTTGTGTTTACTGCCCCGGCGGTCCCGACTCCGATTTCGAATACAGTACTCAGTCCTACACCGGTTATGAACCAACCAGCATGCGCGCGATTCGTGCGAGGTATAATCCATATGTCCAGGCGAGGAGCAGAATAGATCAGCTTAAGCGTTTGGGTCATAGTGTAGACAAGGTTGAGTTTATCTTAATGGGTGGTACCTTCATGTCACTTCCAGCTGAGTACCGTGATTACTTTATTAGAAATCTTCATGATGCTTTGTCTGGCCACACATCTGTCAACGTTGAAGAGGCAGTAGCTTACTCCGAGCATGGAGCAACCAAGTGTATTGGCATGACAATTGAAACGAGGCCAGATTATTGTCTTGGGCCTCACTTGCGCCAAATGCTTTCTTATGGTTGTACACGATTGGAGATTGGAGTCCAAAGCACCTATGAGGATGTTGCTCGAGACACAAATAGAGGACACACTGTAGCTGCTGTAGCCGATTGTTTTTCCTTAGCTAAAGATGCTGGTTTCAAGGTTGTTGCTCACATGATGCCAGATCTTCCAAATGTTGGTGTTGAGAGGGACATGGAAAGTTTTCGGGAGTTTTTTGAGAGTCCCTTGTTTAGAGCTGATGGGCTTAAAATATATCCTACACTTGTAATTCGTGGAACAGGGCTTTATGAGCTCTGGAAAACTGGCAGGTATAGAAATTATCCACCTGAGCAACTTGTGGACATCATAGCTAGGATCCTTGCATTGGTACCCCCATGGACACGTGTTTATAGAGTTCAGCGGGATATTCCCATGCCTTTGGTTACCTCCGGGGTTGAGAAAGGGAATTTGAGGGAGCTAGCATTAGCTCGAATGGAGGACCTGGGATTGAAATGTCGTGATGTTCGGACCAGGGAAGCTGGAATCCAGGATATTCACCACCAAATTAGGCCAGAGGAGGTGGAGCTAGTTCGGCGTGATTATATGGCAAATGAGGGTTGGGAAACATTTCTATCATATGAAGATACACGACAAGATATCCTTGTTGGTTTGCTAAGACTGCGAAAATGCGGCCGCAATACTACATGTCCAGAGCTTATGGGGAAGTGTTCTATTGTTCGTGAACTCCATGTTTATGGAACTGCCGTACCAGTTCATGGACGGGATACTGACAAGCTACAACACCAGGGTTATGGTACACTTTTAATGGAGGAGGCAGAGCGTATTGCTTGCAGCGAACACAGATCAACCAAAATTGCTGTAATTTCAGGGGTGGGCACACGCCATTATTACAGGAAACTGGGATATGAGCTTGAAGGACCTTACATGGTGAAATATTTATTGAAATAA 1689 0.4979 MAAVAEARKAPRPGKGGYEAHGLSEEEARVRAIAEIVNSMVDLSHKGQNVDLNALKSAACRKYGLARAPKLVEMIAALPDAERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPAEYRDYFIRNLHDALSGHTSVNVEEAVAYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFSLAKDAGFKVVAHMMPDLPNVGVERDMESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQIRPEEVELVRRDYMANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELMGKCSIVRELHVYGTAVPVHGRDTDKLQHQGYGTLLMEEAERIACSEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKYLLK* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1745 562 PANTHER ELONGATOR COMPLEX PROTEIN 3 2 560 IPR034687 -
Pvu9g1745 562 PIRSF HAT_Elp3 18 561 IPR034687 -
Pvu9g1745 562 TIGRFAM ELP3: radical SAM enzyme/protein acetyltransferase, ELP3 family 48 560 IPR034687 -
Pvu9g1745 562 Gene3D - 412 561 - -
Pvu9g1745 562 ProSiteProfiles Radical SAM core domain profile. 96 386 IPR007197 GO:0003824|GO:0051536
Pvu9g1745 562 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 369 556 IPR016181 -
Pvu9g1745 562 CDD Radical_SAM 110 357 - -
Pvu9g1745 562 Pfam Acetyltransferase (GNAT) family 413 549 IPR000182 GO:0016407
Pvu9g1745 562 SUPERFAMILY Radical SAM enzymes 133 372 - -
Pvu9g1745 562 SMART MiaB 103 365 IPR006638 GO:0003824|GO:0051536
Pvu9g1745 562 Pfam Radical_SAM C-terminal domain 327 406 IPR032432 -
Pvu9g1745 562 Pfam Radical SAM superfamily 121 309 IPR007197 GO:0003824|GO:0051536
Pvu9g1745 562 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 410 562 IPR000182 GO:0016407
Pvu9g1745 562 SFLD Radical SAM 51 560 IPR007197 GO:0003824|GO:0051536
Pvu9g1745 562 SFLD ELP3-like 51 560 IPR034687 -
Pvu9g1745 562 MobiDBLite consensus disorder prediction 1 22 - -
Pvu9g1745 562 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 2 560 IPR039661 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu9g1745 Radical_SAM 2.3e-18 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1745 K07739 - gmx:100818764 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1745 9 24650300 24655196 Pvu9g1745 9 24650300 24655196 ECH