Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1732 ATGGCTACCCAAAACCAAACACACTCTCATCCAGACACCACCATTGACCCAAACACCGGTTTCTGTTCTTCTTCTAGAACCTTCCACAGCCTCCGTCCAAACGTCCCACTCCCTCCGCTGTCTCAGCCGCTCTCCCTCGCCAATTACGCCCTTTCCCTCCTCCCCGCCACCGCCACAGATAAGTCCGCCCTCATCGACGCCACCACCGGCCGCCATCTCTCCTACTCCCTCTTCCTCCGCCAAGTAAAATCCCTCGCTTCCTCCATCCAATCCCTCACCCCTCTCTCTAAAGGCCACGTGGCGCTAATTCTCACCCCAACCTCCCTACGCGTCCCCGTACTTTACTTCTCTCTCCTCTCGCTTGGCGTCACAGTCGCACCTGCCAACCCGCTGAGTTCCCCATCCGAGTTAACTCACCTCATCCAACTAACAAAACCCGCCATTGCCTTTGCCACCTCCGCCGTCGCCACAAACGTCCCCACCCTCAAATTCGGCACCGTTCTCATCGACTCCCCTCTCTTCCTCTCTATGCTTGACGCCAACGGGGACTCACACTCACGCGCTCCCGGAGTCGAAGTGAGTCAGTCCGACTCCGCCGCAATTCTCTTCTCCTCGGGCACCACCGGGCGCGTGAAGGGCGTGTTGCTCTCGCACCGGAATCTCATCGCACTCATAGGCGGGTTCTGCCACCTGAGGAAAATCCTGCAAGATTCAGACAAAGCGGAGCCGCATCCCGTGTCACTGTTCACGCTGCCGCTGTTCCACGTGTTCGGGTTCGTCGTGCTGGTGAGGTCCATCGCTATGGGGGAGACGCTCGTTCTGATGCAGAGATTCGATTTCGAAGGGATGCTCAAAGCCGTGGAGAGGTATAAAATCTCAATGATTCCGGTGCCGCCGCCGCTCGTGGTGGCCCTCGCCAAGTCTGAGCTCGTAAACAAGTACGACCTCAGCTCGCTGCGGATGCTCGGTTGTGGCGGCGCGCCGCTGGGCGAGCAGGTCGTCGATGACTTCAAAGCCAAATTCCCCAACGTGGAAATTGCCCAGAGCTATGGTCTGACTGAAAGTGGAGGAGGAGTAGCTAGAACATGGGGGCCTGAGGAGATCAAGCACCATGGTTCTGTGGGTCGACTATCAGAAAACATGGAGGCCAAGATAGTGGATCCTGTAACTGGAGAGGCATTACTTCCTTGCCAAAAGGGGGAACTGTGGATTCGAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGAGAAGGCGACAGCTGAAACATTGGATTCAGAGGGATGGCTGAAGACGGGCGATCTTTGTTATTTTGACTCTGATGGTTTCCTCTACATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACACATACTTCACACCAATCCTGAAATTGCTGATGCTGCAGTAGTTCCGTACCCGGATGAAGAAGCAGGACAGATTCCTATGGCCTTTGTAGTAAGAAAAGCTGGAAGCAACATAACTGTAGATCAGATCATGAAGTTTGTGGCGAAGCAGGTTTCTCCTTACAAGAAGATACGGCGTGTTTCTTTTGTCAATTCTATCCCAAAATCTCCTGCTGGCAAAATTTTGAGGAGAGAATTAGTTGATTATGCTCTATCCAGTGGTTCATCCAAATTGTGA 1677 0.5319 MATQNQTHSHPDTTIDPNTGFCSSSRTFHSLRPNVPLPPLSQPLSLANYALSLLPATATDKSALIDATTGRHLSYSLFLRQVKSLASSIQSLTPLSKGHVALILTPTSLRVPVLYFSLLSLGVTVAPANPLSSPSELTHLIQLTKPAIAFATSAVATNVPTLKFGTVLIDSPLFLSMLDANGDSHSRAPGVEVSQSDSAAILFSSGTTGRVKGVLLSHRNLIALIGGFCHLRKILQDSDKAEPHPVSLFTLPLFHVFGFVVLVRSIAMGETLVLMQRFDFEGMLKAVERYKISMIPVPPPLVVALAKSELVNKYDLSSLRMLGCGGAPLGEQVVDDFKAKFPNVEIAQSYGLTESGGGVARTWGPEEIKHHGSVGRLSENMEAKIVDPVTGEALLPCQKGELWIRGPTIMKGYVGDEKATAETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEEAGQIPMAFVVRKAGSNITVDQIMKFVAKQVSPYKKIRRVSFVNSIPKSPAGKILRRELVDYALSSGSSKL* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1732 558 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 28 547 - -
Pvu9g1732 558 SUPERFAMILY Acetyl-CoA synthetase-like 56 551 - -
Pvu9g1732 558 MobiDBLite consensus disorder prediction 1 20 - -
Pvu9g1732 558 Pfam AMP-binding enzyme C-terminal domain 465 540 IPR025110 -
Pvu9g1732 558 Pfam AMP-binding enzyme 58 456 IPR000873 -
Pvu9g1732 558 CDD 4CL 38 546 - -
Pvu9g1732 558 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 547 - -
Pvu9g1732 558 Gene3D - 31 451 IPR042099 -
Pvu9g1732 558 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Pvu9g1732 558 Gene3D - 452 552 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1732 Pvu-Chr9 24482285 24486344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1732 7 558 Monolignol Biosynthesis Gene Families AT5G63380 59.397 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1732 K01904 - gmx:100777435 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1732 9 24482285 24486344 Pvu9g1732 9 24482285 24486344 ECH