Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1730 ATGGGGTTTCATGACTTTGTTTTGCTATTTTGTTCAGTTTGGTGTGTCTTTTTTGTGGGTAGTTGCAGTTCTCAGTTGCAGTCCTCTCAGACCCAAGTGCTTCTCCAGTTGAAAAAGCACTTGGAGTACCCAAGACAATTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTATTTCTTCTTCTGGGCAAGTGAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCTCCATCTTGGGTGATAAGCCAACCAAGGGTAGAGATTTTGATGGGTTTGCCATTCCTAATCAAACACTATCAGATATCTTCTCCATGGACTCTTTTGTGGCTACTCTGGCAAGGTTAACTGGCCTGAGAGTCCTTAGTCTTGTGTCTTTGGGCATGTGGGGACCACTGCCTGATAGAATTCACAGACTTTATGCACTTGAACATTTGGACTTGAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGTGAACCTTCAAACTCTTGGATTGGGTGATAACTTCTTCAATGGTACAATCCCAAACTTGTTCAATTCATCAAGCAATCTCTCAGTTCTTAGTTTGAGGAATAACAGGTTGAAGGGTCCATTTCCACCTTCAATCCTTAGTGTCACCTCTTTAAAAGACATTGACATGTCAAGCAATCAAATATCAGGGATCCTGCAAGATTTTAGTGCTTTGAGTAGTTTGGAACAGCTAGATTTAAGAGAAAACAAATTAGAGTCTTTCCTGCCAGCAATGCCAAAAGGGTTGATTAGTCTTTTCTTCAGCAGAAATTCCTTCTCAGGTGAAATTCCCAAGCGCTATGGTCAACTTAACGGGCTTCAGAAGCTAGATGTTTCCTTCAATGCACTCACTGGCACTGCTCCTGCTGAACTTTTCTCTTTGCCCAACATCAGTTACTTGAATTTGGCTTCCAACTTGTTGACTGGACCATTGCAAAGTCACCTAAGATGTAGCAGCCAACTTACATTTGTTGACTTATCATACAATAGGTTAGTGGGGGACTTACCTTCTTCTCTGAGCACTAGATCAGAAACTAGAGTTGTTATGAGTGATGGAAACTGTTTATCTGGGAGTGTGCAGCATCAGCATGCAGTATCCTACTGCACAGAACCTCATGTGAAGAAGAAATCATATAGAGTTGGAATTTTTGTTGGTGTCATTGTAGGAATTCTTTTAATCTCTGTGGTCTTGGCTTTGGCCATTGTTATAACTTGTAAGAAGTGCTTCCTTCGAGGTGTGTCAGAGAAGCACCTATTGCATAAAACTGTTCAAGATAGCAGCTACGAGCCAGGGTTCTCCTCTGAGCTTGTCACAAATGCAAGGTATATTTCTGAAACTGCCAAGTTAGGCAGAGAAGACCTCCCCACATGTAGGTCGTATTCTTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGAGAACTCTACTTTTATGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAACTGGAGAGTGGGATACAGATTGTAATAAGGTCCTTGCCTGTGTCAAAAAAGTATTCAGTTAGAAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTCCGTCACCCTCATTTGGTATCCCTCCTAGGTCACTGCATTGATGGTGTTGTAGGAGAGAATAATGAGACAAATGTCTTTCTCATTTATGAGTATGTGCCAAATGGGACTTTTCAAATTTATCTCTCTGGAGACAGTCCTGGCAAGGTTTTCAATTGGTCAGAGCGATTGTCAGTACTAATTAACATTGCTAAGGCTGTCCACTTCCTACACACTGGCATGATACCTGGTTTCTTCAAAAATCGACTTAAGACCAACAATATCTTGCTGAATGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTATATCAGAAGAAGCTGATGCATGTGGGGTAAAAGGAGAAAGTCCTAATTCGTGGCAAATGAAAATGTTAGAGGATGATGTTTATAGCTTTGGATTCATACTACTGGAGGCACTGGCTGGACCTTCAGTATCAGCTAAAAGAGAAGCAGTTGTGCTGAATGTAATGGCATCTTTCAATAGTGAGGATGGTTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACTTGCTCAAAAGAATCTCTTTTTGTTGTGATTTCCATAACAAATAAATGTATATCTCCTGAGTCATGGAACCGACCATCCATTGAGGATGTCCTTTGGAACCTTCAGTATGCTTCTCAAATTCAGGCAACAGCTGATGGGGATCACAGAATTTGA 2292 0.4101 MGFHDFVLLFCSVWCVFFVGSCSSQLQSSQTQVLLQLKKHLEYPRQLEIWRDRWTDLCSISSSGQVNVTCKDNFVTELSILGDKPTKGRDFDGFAIPNQTLSDIFSMDSFVATLARLTGLRVLSLVSLGMWGPLPDRIHRLYALEHLDLSSNYLYGSIPPKICTMVNLQTLGLGDNFFNGTIPNLFNSSSNLSVLSLRNNRLKGPFPPSILSVTSLKDIDMSSNQISGILQDFSALSSLEQLDLRENKLESFLPAMPKGLISLFFSRNSFSGEIPKRYGQLNGLQKLDVSFNALTGTAPAELFSLPNISYLNLASNLLTGPLQSHLRCSSQLTFVDLSYNRLVGDLPSSLSTRSETRVVMSDGNCLSGSVQHQHAVSYCTEPHVKKKSYRVGIFVGVIVGILLISVVLALAIVITCKKCFLRGVSEKHLLHKTVQDSSYEPGFSSELVTNARYISETAKLGREDLPTCRSYSLEELKEATNNFENSTFMGENIYGKLYRGKLESGIQIVIRSLPVSKKYSVRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGENNETNVFLIYEYVPNGTFQIYLSGDSPGKVFNWSERLSVLINIAKAVHFLHTGMIPGFFKNRLKTNNILLNENWMAKLSDYGLSIISEEADACGVKGESPNSWQMKMLEDDVYSFGFILLEALAGPSVSAKREAVVLNVMASFNSEDGWKQIVDPVVQATCSKESLFVVISITNKCISPESWNRPSIEDVLWNLQYASQIQATADGDHRI* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1730 763 Gene3D Transferase(Phosphotransferase) domain 1 566 761 - -
Pvu9g1730 763 SUPERFAMILY Protein kinase-like (PK-like) 466 748 IPR011009 -
Pvu9g1730 763 SUPERFAMILY L domain-like 29 371 - -
Pvu9g1730 763 Pfam Protein tyrosine and serine/threonine kinase 488 744 IPR001245 GO:0004672|GO:0006468
Pvu9g1730 763 PANTHER BNAA09G06560D PROTEIN 3 761 - -
Pvu9g1730 763 Gene3D Phosphorylase Kinase; domain 1 447 565 - -
Pvu9g1730 763 PANTHER OS07G0166700 PROTEIN 3 761 IPR045272 GO:0004714|GO:0006468
Pvu9g1730 763 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Pvu9g1730 763 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Pvu9g1730 763 ProSiteProfiles Protein kinase domain profile. 483 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1730 763 Gene3D Ribonuclease Inhibitor 27 259 IPR032675 -
Pvu9g1730 763 SMART LRR_typ_2 236 259 IPR003591 -
Pvu9g1730 763 SMART LRR_typ_2 141 165 IPR003591 -
Pvu9g1730 763 SMART LRR_typ_2 213 235 IPR003591 -
Pvu9g1730 763 SMART LRR_typ_2 281 305 IPR003591 -
Pvu9g1730 763 Gene3D Ribonuclease Inhibitor 260 392 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1730 Pvu-Chr9 24427628 24432927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1730 8 695 Miscellaneous Gene Families AT5G14210 51.286 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pvu9g1730 PK_Tyr_Ser-Thr 5.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1730 - - gmx:100802978 1282.32