Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1725 ATGGTTTCAACCAGACGCAACAGTGGATCTTTCTCTAACAACACCAACAAGAGGGCTTCTTCTTCTGAAGACAAAACTCCCTCTCCTTCCCCCAAGCGACAAAAGGTCGACAATGTTGCTGCCGCCTCGGAGAAACCGATGCCGCCGCCGGAAAATTCCAAGGATTTGGGCATGTCGGAGCCACCCCCTGATCCCGGAGAATGCGAATCTCGAGACGCTCAGATCGCCGACGCCGGCAATCTAGACGGCAAGGCCGAACCCACGCCGCCGATCGCCGATGGTTCTACACCGACTGTGGTTGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGGCTATATATCAGAAGCAAAACCCAAATTTCGAAGCTTCAGTTCCCTGGTGCAGACTCTTGTCTCAATCTGCGCAGAATCCGAATGTTTTAATTTGCACACCCAACTTTACTATTGGGTCTAGTCGGGGTTGCAATTTCCCGTTGAAGGATCAGACTATAAGTGGAAATTTGTGCAAGATCAAGCACACGCAGCGCGAGGGAAGTGCAGTGGCCGTGCTAGAAAGTACGGGTAGCAAAGGATCGGTGGTAGTGAATGGCACGCTCGTCAAGAAGAGTACCAGCTGTGTGCTTAACTCGGGGGACGAGGTGGTTTTTGGTTTGATTGGGAATCATTCTTATATTTTTCAGCAAATAAATCCTGAAGTTGCAGTCAAGGCTGCAGAAATTCAGGGTGGTGTTGGCAAGTTTTTCCAGATTGAAAGGAGGGCTGGAGACCCTTCAGCCGTGGCTGGAGCTTCTATTCTGGCTTCTCTTTCTAGCCTCAGACGGGATCTTACAAGATGGAAGTCTCCTTCACAGACTACCAGTAAACCTCATCAGGGTACTGATGTTCCTAGTCATTCTGTTCTCCCTGATGGTACAGAGTCTGGGCTCGATGGTCTGGAAGGCAACTCTGCTCCAAATATAGCGACAGATAAAGCTGCTGATGTTGGAGCAAGCGACAAGGATTTGCCTATGGATTGCGATTCAGATGATGCTGGCACAGAGGCAGGCAATGTATTCGAAGAAAGACATGGAACGAGGGATGCGCAAGCTGCATCGACTTCGGGTACTTCTTTACGCACTGCAGTTTTTAAAGAGGATGTTCTTGCTGCAATACTGGATAGGAAAGAAATAGAAGTGTCCTTTGACAACTTCCCTTACTACTTAAGTGAGAATACAAAAAATGTTCTAATTGCAGCTTGCTTTATACACCTGAAGCATAGAGAACATGCAAAGTACACCACCGATCTTACAACCATAAACCCTCGGATTCTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTAGCAAAAGCACTTGCGAAACACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTTGCCTTTGGGTGGTTTAACATCCAAGGAAGCTGAGCTGCTAAAAGATGGATTTAATGCAGATAAGTCCTGTGGCTGTGCTAACCAAAGTCCTTTAACTACAGACATGGCTAGGAGCATGGATCCACAAGCTAGTGAACCAGATACACCTAACTCCTCAAATGCACCTACTCCATATGGCTTTGAGTCTCAACTTAAGTTGGAAGCTGATAATGTACCATCTACGTCTGGGACAGCTAAAAATTGTGTGTTTAAACTAGGTGACAGGGTAAAATACAGTTCATCTTCTGGGGGAATATATCAGCTTCAGACAATTTCTGCAAGGTACAGGGGTCCAGCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATACCTGATGGAGTTGACCTTGGAGGTTGCTGTGAGGGTGGTCAAGGATTTTTCTGCCATGTGAATGATCTTCGGTTGGAAAACAGTGGCATTGAAGAACTTGACAAAGTTCTCATTAATACATTATTTGAGGTTGTGGTTAGTGAGAGCAGAAATGAACCCTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCGTTTTCATTTAAAAGTAGGCTTGAAAATCTTCCGGACAATGTGGTGGTAATAGGTTCACACACTCACACTGACAGTCGCAAGGAGAAGTCACATCCTGGGGGTTTACTTTTTACAAAGTTTGGCAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGACAGGGGAAAGGAGGTCCCAAAGCCAAACAAAACCTTAACTAAGCTTTTCCCGAATAAAGTGACAATTCACATGCCACAGGATGAAGCACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGATGTTGAGACTCTTAAAATTAAAGGAAATTTGCACAATTTACGATCTGTTTTGAGCCGCTGTGGGGTGGAATGTGAAGGACTTGAATCCTTGTGCACTAAGGATCAAACTCTTAGTATTGAAAATGCAGAAAAGATTGTTGGTTGGGCTATAAGCCGTCATCTCATGCAGAATGCTGAAACTGATCCTGATGCAAAGCTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGGATCTTACAGTCTATCCAGAATGAGTCAAAAAGCCTGAAAAAGTCTCTTAAGGATATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAACGACATTGGTGTTACTTTTGATGATATTGGTGCTCTTGAAAATGTCAAGGACACATTGAAGGAATTGGTTATGCTTCCTTTACAGAGGCCCGAGTTATTTTGCAAAGGACAATTAACCAAGCCATGCAAGGGCATCCTTTTATTTGGCCCTCCTGGAACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAATTTCATCAACATTTCCATGTCAAGTATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTTTTTTCCCTGGCAAGTAAAATTGCTCCTAGCGTGATATTTGTTGACGAAGTCGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTAAATTGGGATGGCTTACGCACAAAGGATTCAGAGAGGGTTCTGGTGCTTGCAGCCACTAATAGGCCTTTTGACCTAGATGAAGCTGTCATAAGGAGGCTGCCTCGGAGGTTAATGGTAAATTTGCCAGATGCTCCAAATAGAGCAAAAATATTGAAAGTTATACTGGCAAAAGAAGACTTGTCTTCTGGTCTTGATTTGAATGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCACAGCGGCCCATTAAAGAGATATTAGAGAAGGAAAAAAAGGAACAGGCTGCTGCTCTAGCAGAAGGTAGAGCTGCTCCCGCAAAGTGTGGAAGCAAAGATATCCGATCTTTAAACATGGAAGATTTCAAACATGCACATCAACAGGTCTGTGCAAGCGTTTCGTCTGAATCTGTAAATATGACCGAGCTTCAACAATGGAATGAACTATACGGTGAAGGTGGTTCAAGAATAAAAAGAACACTAAGCTATTTCATGTGA 3621 0.4383 MVSTRRNSGSFSNNTNKRASSSEDKTPSPSPKRQKVDNVAAASEKPMPPPENSKDLGMSEPPPDPGECESRDAQIADAGNLDGKAEPTPPIADGSTPTVVADKPRGSFSSWAIYQKQNPNFEASVPWCRLLSQSAQNPNVLICTPNFTIGSSRGCNFPLKDQTISGNLCKIKHTQREGSAVAVLESTGSKGSVVVNGTLVKKSTSCVLNSGDEVVFGLIGNHSYIFQQINPEVAVKAAEIQGGVGKFFQIERRAGDPSAVAGASILASLSSLRRDLTRWKSPSQTTSKPHQGTDVPSHSVLPDGTESGLDGLEGNSAPNIATDKAADVGASDKDLPMDCDSDDAGTEAGNVFEERHGTRDAQAASTSGTSLRTAVFKEDVLAAILDRKEIEVSFDNFPYYLSENTKNVLIAACFIHLKHREHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKHFGAKLLIFDSHLPLGGLTSKEAELLKDGFNADKSCGCANQSPLTTDMARSMDPQASEPDTPNSSNAPTPYGFESQLKLEADNVPSTSGTAKNCVFKLGDRVKYSSSSGGIYQLQTISARYRGPANGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGCCEGGQGFFCHVNDLRLENSGIEELDKVLINTLFEVVVSESRNEPFILFMKDAEKSIVGNGDPFSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHNLRSVLSRCGVECEGLESLCTKDQTLSIENAEKIVGWAISRHLMQNAETDPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDSERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSGLDLNAIASMTDGYSGSDLKNLCVTAAQRPIKEILEKEKKEQAAALAEGRAAPAKCGSKDIRSLNMEDFKHAHQQVCASVSSESVNMTELQQWNELYGEGGSRIKRTLSYFM* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1725 1206 Gene3D - 1074 1168 - -
Pvu9g1725 1206 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 85 1206 - -
Pvu9g1725 1206 Coils Coil 862 882 - -
Pvu9g1725 1206 CDD FHA 127 227 IPR000253 GO:0005515
Pvu9g1725 1206 Pfam FHA domain 148 217 IPR000253 GO:0005515
Pvu9g1725 1206 Pfam AAA+ lid domain 1096 1130 IPR041569 -
Pvu9g1725 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 901 1180 IPR027417 -
Pvu9g1725 1206 Gene3D - 900 1181 IPR027417 -
Pvu9g1725 1206 MobiDBLite consensus disorder prediction 501 529 - -
Pvu9g1725 1206 CDD AAA 940 1073 - -
Pvu9g1725 1206 SMART AAA_5 938 1075 IPR003593 -
Pvu9g1725 1206 SUPERFAMILY SMAD/FHA domain 119 226 IPR008984 GO:0005515
Pvu9g1725 1206 ProSitePatterns AAA-protein family signature. 1045 1064 IPR003960 GO:0005524|GO:0016887
Pvu9g1725 1206 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 85 1206 - -
Pvu9g1725 1206 MobiDBLite consensus disorder prediction 1 27 - -
Pvu9g1725 1206 MobiDBLite consensus disorder prediction 278 300 - -
Pvu9g1725 1206 Pfam ATPase family associated with various cellular activities (AAA) 942 1071 IPR003959 GO:0005524|GO:0016887
Pvu9g1725 1206 Gene3D - 126 234 - -
Pvu9g1725 1206 MobiDBLite consensus disorder prediction 1 103 - -
Pvu9g1725 1206 MobiDBLite consensus disorder prediction 278 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1725 Pvu-Chr9 24376195 24388260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1725 901 1133 Calmodulin-binding Proteins AT3G56690 41.772 4.23e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1725 - - gmx:100780098 2091.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2169 3 42515780 42528428 Pvu9g1725 9 24376195 24388260 PCT