Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1713 ATGGACTGTAAAAAGGATGGTGCCTTAAGGGCAAAAGAACTTGCAGAGAAGATGCTTTTACAGAAGGACTTTGGTGGGGCAAGAATGCTCGCAATGAAGGCTCTAGATTTATATCCCAATCTTGATGGCCTTCCTCGATTTCTGGCAACTATTGAGGTGTATATCTCAGCCGATAAAAAAGTTAATGGAGAAGTTGATTGGTATAGGATCCTTGGTGTGCAACCCTTGGCTGATGAAGAAACAATTCGAAGACGATATAGGAAACTGGCTCTTACTCTGCATCCTGATAAAAATAAATCCGTTGGTGCAGATGGGGCGTTTAACCTTATCTCACAGGCTTGGAGTTTATTATCTGATAAAGCCAAGAGAGTCACATATGACCAAAAGTACAACTTATGGCGTACATATCTTGGAAATCCTGGTGGGAAACCATCTGTGGCAGCTACTCAGAATGGTTTATATAGTAATTTATTCACTCCTGTGTTGTTGAAACCCACATTTTGGACCATTTGCAATTTCTGTAAGACAAAGTTTGAGTACCATAAAATTTATATTAATTCCGACCTGGTCTGTACATGCTGTCATAAGCCATTTGTGGCTTCTGAGACTTCAACTCCACCTGGATACAGAAGTGGTTCATCCACTTCAAGAATTTCTCAGATGAAGCAACATAACTTCAACTCAAGCAGAATGGAAAGAAGTAATGGAAATCATGTTCCCGGAAGGACAACAATGTCTTCTGTCAATTCAGCACATGGATCAGGTCCTTTCTCTATGCCTAGTGGCATTTCCCACATACCAACATCAGCTTCTAGTGCTGCAGAAGCTCTTGGTTCTTTTAGGATGTCTTACGAAGCCTTGAAGAGAAGGTATGAAGATTCAGCTGTGTCGAGGGAGGATGCTCATTTTGGGAAAATTCATTCTGCAGAGAAAACAGGTTCAGTTTTTCAGTCCTCTTGTATTGGATCATATTCTATTATGAAAGGTGACAAGCCAAGGAAGAGAAGGTCCACTGATGAACATAAAGTAGGTAGCGATAGAAGAGATATGGAAAGCAAAACAGTATCTCAAAATGAGGGAACAAACTTGGCTAATGAATTTGGGTCAGGAAGGGTAAATGCTGCCGGAAATTACAAACGCAATGGTGTTAGGGACGGATCACAGCTTCAAATGAAGCAGTTATTGGTGGAAAAGGCTCGGAAGGAGATTCTTAAAAAGCTTGATGAATGGAAAGCTTCCTCTGCATCAAAGAGTCTAGACAAGTCAAAGAATACTGACACAGAAATCAGTGAGAAGGGGAAAAGTTGGGAAACTAATGGTTTAAAACCTGGTGCACAAGAATTTGTTGCTTCTAAGGCTGCAGGCAAGAAGTGTTTTTCTGTTCATCCAGATCCTGAGCTGCCTGGTTCTCTCTCTATGAATGTTCCAGACCCAGATTTCCATGATTTTGATGGAGACCGTATTGAAAATGCTTTTGGTGAGAACCAGGTGTGGGCTGCATATGACAACGATGATGGCATGCCCCGCTTCTATTGTTTAATCCATGATGTAATCTCGAAGAATCCTTTCAATATGAGGATAAGCTGGTTGAATACCAAAAGCAATGACGAATTGGCCCCAATAAAGTGGATCAGTTCTGGCTTTCTAAAGACCAGTGGAGATTTCAGAATAGGAAAGCGTGTGTCCTATAGCACTCTTAACTCCTTCTCGCACAGGGTGAAGTGGACAAAAGGTTCGAGAGGGGTTGTCAATATATATCCGAAGAAAGGTGATGTATGGGCATTGTATCGGAACTGGTCCCTTGACTGGAATGAATTCACCGAAGATGAAATCATACAGAAATATGACATGGTGGAGGTGCTTGAAGACTACAGTGAAGAGCAAGGAGTGAATGTTGCCCCACTTGTCAAGCTTGCAGGTTTCAAGACGGTATTTCGCCAGAATGTTGATCCAACAAAAATCAGGAATATTTCAAAGGCGCAGATGTTTCGTTTCTCATATCAGGTACCTTCATACATGCTTACTGGTGAAGAGGGTCCCAATGCTCCTAAAGGTTGCTTGGAGCTTGATCCTGCTGCTACGCCGATGGAGCTTCTTCAGGTGTTAGCTGAAGATCTGGAGCAAGAAATAACAATGACAACTGAAAAATCTGTGGAAGATGAATTGAAACACAAAGAGAATTTGACGGAGGAGGGCATGCTTAAGGGGTGCCAGACAACTAAGGAAGAAGGTTCTGATGCAGGATTGGGAGAGAAGAGAAGCAAGCCGGAGATTTTGTTTGTATATAAGCGGAGACGTCTGGGGGAAAAGAGAGCTGTGAAGTGTTAA 2328 0.4214 MDCKKDGALRAKELAEKMLLQKDFGGARMLAMKALDLYPNLDGLPRFLATIEVYISADKKVNGEVDWYRILGVQPLADEETIRRRYRKLALTLHPDKNKSVGADGAFNLISQAWSLLSDKAKRVTYDQKYNLWRTYLGNPGGKPSVAATQNGLYSNLFTPVLLKPTFWTICNFCKTKFEYHKIYINSDLVCTCCHKPFVASETSTPPGYRSGSSTSRISQMKQHNFNSSRMERSNGNHVPGRTTMSSVNSAHGSGPFSMPSGISHIPTSASSAAEALGSFRMSYEALKRRYEDSAVSREDAHFGKIHSAEKTGSVFQSSCIGSYSIMKGDKPRKRRSTDEHKVGSDRRDMESKTVSQNEGTNLANEFGSGRVNAAGNYKRNGVRDGSQLQMKQLLVEKARKEILKKLDEWKASSASKSLDKSKNTDTEISEKGKSWETNGLKPGAQEFVASKAAGKKCFSVHPDPELPGSLSMNVPDPDFHDFDGDRIENAFGENQVWAAYDNDDGMPRFYCLIHDVISKNPFNMRISWLNTKSNDELAPIKWISSGFLKTSGDFRIGKRVSYSTLNSFSHRVKWTKGSRGVVNIYPKKGDVWALYRNWSLDWNEFTEDEIIQKYDMVEVLEDYSEEQGVNVAPLVKLAGFKTVFRQNVDPTKIRNISKAQMFRFSYQVPSYMLTGEEGPNAPKGCLELDPAATPMELLQVLAEDLEQEITMTTEKSVEDELKHKENLTEEGMLKGCQTTKEEGSDAGLGEKRSKPEILFVYKRRRLGEKRAVKC* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1713 775 MobiDBLite consensus disorder prediction 414 435 - -
Pvu9g1713 775 MobiDBLite consensus disorder prediction 326 372 - -
Pvu9g1713 775 Pfam Domain of unknown function (DUF3444) 472 678 IPR024593 -
Pvu9g1713 775 MobiDBLite consensus disorder prediction 414 443 - -
Pvu9g1713 775 Coils Coil 696 716 - -
Pvu9g1713 775 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pvu9g1713 775 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pvu9g1713 775 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pvu9g1713 775 PANTHER HEAT SHOCK PROTEIN-LIKE 1 724 - -
Pvu9g1713 775 PANTHER BNAC03G44070D PROTEIN 1 724 - -
Pvu9g1713 775 CDD DnaJ 66 119 IPR001623 -
Pvu9g1713 775 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pvu9g1713 775 SUPERFAMILY Chaperone J-domain 63 145 IPR036869 -
Pvu9g1713 775 Gene3D DnaJ domain 64 165 IPR036869 -
Pvu9g1713 775 SMART dnaj_3 65 122 IPR001623 -
Pvu9g1713 775 Pfam DnaJ domain 66 127 IPR001623 -
Pvu9g1713 775 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pvu9g1713 775 MobiDBLite consensus disorder prediction 328 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1713 Pvu-Chr9 24214286 24218497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1713 8 207 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.850 2.49e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1713 - - gmx:100797672 1250.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1713 9 24214286 24218497 Pvu9g1713 9 24214286 24218497 ECH