Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1700 ATGGCAAAAGAGCAGCAAAAGCAGGATCCCGGGGCATTCACCAACTCTTTGCAAAACCCAAACCAGGAATTGCAGGGTAAAGGTGAAGTGGTAAAGGAGGAGGCTGAGGCCCCTTTCACTCTCAGCGTCACTTCCAAGGTTTTGTACATGTTGGGAGACATCACTGCAGGGCCTGCGTCTATGTTTACGCAATGGCTCCAATTAGTTCGTAAACGCACTTCCAATTATCGCACTTCTGGCTTCCCTCACCGTTCTTCCACCATGCCTTCCAGCCCAGGAGAATCTATAGAGGATGTGAAAAATGACCAGCAATCAGAAACTAGTTTGTGGGAGAGACTTGGTAAAGCTGAAGTGTTGGACATTGAATCGAGTTCATTTTCTTGGGACAGACTCTCTTCGCTTCACCACACTGAACATACTAGCAGCAATGAACATTCTGAGGATGAAATGAACCGAGCTCTTGAGGTAACAGTAAATTCTGGAGGGGTAGTCTTCTTTGCCTTTTTCAGTGGTTGTGGGAGTGGTGATGCTTGTCCAAAACAAGAAACAGCTGTTATAAAGATATCATCTTCAAGAATGGCAACACAATCCGAACGTCTTGGTTATGAATTTGCCAAGTGGTTGGGAATCCAAACTCCTCAGGCTAGAGTCATCCACAATACCAGTTTAGAGTGGATACAAATAAAGGAAGCTACAGAAAAAGCAAGAGATGCGGCAGGTTCTGCAGGTGATGAAATTGGTGAACTGACATGCACAGAACTTCTGGAAGCACTTGATCTTAGCCGATGTCTCATGTTTATGAGTTATGTGCATGGTTCACCCTTGCTTGAAAGCTCTAGAGCATTTGAGTCACAGGAATATGCAGAACGAACATCAGCAGCTCTTGGCAGAGTACTGATGCTGGATCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGGCAGCTTAGATGGCGTGGGAACTCTGCAAATTTGTTATTGACTGAAAAAGTAATCTCTGCAAGTGTGGATACAATAGGAGAAACCTTTAATTCTGCGGTGACCCGATGCGGACCAAGGGTGAGTAGGGCACTTCAAAAAGACAAAAGGTCAACATCAGTTGATAGTAGAATGAATGTATCACAATACTCTGGTCTTTCTGACATCAAATACACCTCAATAACCCATAACTTGAACTTGAAAATTCAAACATCAGGAGAATCAATGACAACTGACTTTAACATTGTGGCAATTGATTCTGGCGTACCCCGTCGACCCCCTGCTGGAAAACGTGCAGATGACCAGGTTAATTATCCTAAGTTGGTCGAGTTACTTCTTAATAGCTCTGAGTTTTCCTCTAACCTATTACATGATATAACTGGAGGAAGGTTAGGATGTCCTCATCTAGAAGAGACTAACACAACAACAGATGTTTACATAGATGATGCATCAGTAGTTCACGAGTTCCGTAATGGTTTTCGTGCTGCTCTCATGGACATGCAGGGATTCCATATATTCCTACTCACACTTCATCAAAAACTTGATAATTTGTTAAGGGTATTTATGAATGCTGTAGGCAAAATATCATCTGGAGAGTCTGAAAAGGAGGATGCAGTGGTTCATGACTTACCTTCACCAGCTTTTTCAGGCAGTTGTCTTTCCCCATATATTAAAGAGAAACATTCTAATGATATTCATCAAGATTGGAGTGATCCAGAATCACAGAGAACTGCTCCAAGGGCATCAACATCTTCAAGCATTAGAGATTGCTGTGACTCTGCCTCTCCTGCGTCAAGAGAAGGTTGGCATGGAAAGCACTCTAAAGGAAGCGCGGAGTCACTTCGTGGTCTGCGCTTGACAACTAAGCTTCGTGACTTACATAAGTTTGCCAAGGTTGACTCAGAATCTAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGATGCAGTCAAGTTATGCTTGGACAACAATTTTAATACAGGATTTTTTGAGGGTAGTGATAACAACACTGTTGTTGATGCATATGAACTCAAGGTCAGACTCGAGCATATTCTTGAGAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCTGTTACAAATAGTCTGTTTATTGGTGGAGCACTAGCTGCAAGATCTACATACACACTGCAACGCTTGGGAATTACACATATTTTATGTTTGTGTACAAATGAAATTGGCCAATCAGATTCTCAGTTTCCTGATCTATTCACATACAAAAATTTCTCTGTGTGTGACAATGAAGATTCTAACATCAGCAGCATATTTGAAGAGGCTTGTGATTTTATAGATTATGTTGAGAAAGCTGGTCAAAGTGTTTTAGTTCATTGCTTTGAGGGGAAAAGCAGAAGTGCCACTCTGGTCCTTGCTTTCCTGATGCTTAGGAAGAAATTCACTTTGTTAGAAGCATGGAATGCTCTAAAGCGAGTTCATCGTCGATCTCAGCCCAACGATGGTTTTGCAAAGATCTTACTTGAACTAGACCAGAAACTGCATGGCAAGGTTTCAATGGAGTGGCAGCAACGGAAACCAATGATGAAAATTTGTCCCATCTGTGGCAAGAATGCTGGACTAAGTAGTAGTTCACTTAAACTTCACCTTCAGAAATCACACAAAAAGTTGTCATCAGGGAGTGTTGATAGTGCCATGACAATGGAGATCCAGAAGGCATTAACAACTTTGAAGATTAGCCGTGGTGGGAGTGTTAGTCCCACACAAAGACACTCTCATTCTATGGTTGATGCATAG 2766 0.4212 MAKEQQKQDPGAFTNSLQNPNQELQGKGEVVKEEAEAPFTLSVTSKVLYMLGDITAGPASMFTQWLQLVRKRTSNYRTSGFPHRSSTMPSSPGESIEDVKNDQQSETSLWERLGKAEVLDIESSSFSWDRLSSLHHTEHTSSNEHSEDEMNRALEVTVNSGGVVFFAFFSGCGSGDACPKQETAVIKISSSRMATQSERLGYEFAKWLGIQTPQARVIHNTSLEWIQIKEATEKARDAAGSAGDEIGELTCTELLEALDLSRCLMFMSYVHGSPLLESSRAFESQEYAERTSAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLLTEKVISASVDTIGETFNSAVTRCGPRVSRALQKDKRSTSVDSRMNVSQYSGLSDIKYTSITHNLNLKIQTSGESMTTDFNIVAIDSGVPRRPPAGKRADDQVNYPKLVELLLNSSEFSSNLLHDITGGRLGCPHLEETNTTTDVYIDDASVVHEFRNGFRAALMDMQGFHIFLLTLHQKLDNLLRVFMNAVGKISSGESEKEDAVVHDLPSPAFSGSCLSPYIKEKHSNDIHQDWSDPESQRTAPRASTSSSIRDCCDSASPASREGWHGKHSKGSAESLRGLRLTTKLRDLHKFAKVDSESNKELEQWNEMLKNDAVKLCLDNNFNTGFFEGSDNNTVVDAYELKVRLEHILERIALISEAANTERPSAVTNSLFIGGALAARSTYTLQRLGITHILCLCTNEIGQSDSQFPDLFTYKNFSVCDNEDSNISSIFEEACDFIDYVEKAGQSVLVHCFEGKSRSATLVLAFLMLRKKFTLLEAWNALKRVHRRSQPNDGFAKILLELDQKLHGKVSMEWQQRKPMMKICPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTTLKISRGGSVSPTQRHSHSMVDA* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1700 921 MobiDBLite consensus disorder prediction 1 30 - -
Pvu9g1700 921 SUPERFAMILY Protein kinase-like (PK-like) 64 428 IPR011009 -
Pvu9g1700 921 Pfam Dual specificity phosphatase, catalytic domain 708 835 IPR000340 GO:0008138|GO:0016311
Pvu9g1700 921 MobiDBLite consensus disorder prediction 567 585 - -
Pvu9g1700 921 ProSiteProfiles Dual specificity protein phosphatase domain profile. 694 839 IPR020422 GO:0006470|GO:0008138
Pvu9g1700 921 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 18 920 - -
Pvu9g1700 921 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 694 839 IPR029021 -
Pvu9g1700 921 CDD DSP 695 832 - -
Pvu9g1700 921 Gene3D - 274 415 IPR036940 GO:0016301
Pvu9g1700 921 Gene3D Protein tyrosine phosphatase superfamily 677 849 IPR029021 -
Pvu9g1700 921 SMART dsp_5 694 836 IPR020422 GO:0006470|GO:0008138
Pvu9g1700 921 MobiDBLite consensus disorder prediction 8 25 - -
Pvu9g1700 921 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 763 815 IPR000387 GO:0016311|GO:0016791
Pvu9g1700 921 MobiDBLite consensus disorder prediction 77 98 - -
Pvu9g1700 921 MobiDBLite consensus disorder prediction 557 602 - -
Pvu9g1700 921 Pfam Actin-fragmin kinase, catalytic 105 414 IPR015275 -
Pvu9g1700 921 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 18 920 IPR035010 GO:0004721|GO:0009737|GO:0043622
Pvu9g1700 921 ProSitePatterns Tyrosine specific protein phosphatases active site. 781 791 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1700 Pvu-Chr9 24018948 24025608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1700 30 905 Protein tyrosine phosphatase (PTP) family AT5G23720 62.500 0.0 1089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1700 K14165 - gmx:102661225 1462.59