Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1690 ATGAAAGCAGCCCCAAACGTCCCACACGCGAGTGCATTTCACGCTCCAAATCCTTCACATTACACACGCTTACTCTTTTCATGCTCTTCAACAAAACCCTCTTTCCCTCAGCGTTTTGAAGCGAAAGGAAAAACGGCGAAGATGAAAGATTCAGCGGAAACAGATCCTATCGCTGAGTCTCTGAACCTGCTGAGTACACTCCTGGACTCGGAACTACCCAGCGTCACAAACTTCAAAGGGAAATGGTCACTCGCCGGAGTCAAACTCACCCATCTCCAAACTCACCTCACCGATTTCTCCGCCGAGTTCCCCAACGCTTCCACCACCAATCCCCTCTCCCTCCACCTCCTCCACTCCATCTCCCACACGCTCCACGAGGCCGTTTTACTCGCCCGCACGTGTCAGCCCCAACACCTCCCCAACGGCAAGCTCAAAACCCAAAGCGACCTCGACTCCCTCCTTGCTACCCTTGACCGCCACGTCACTGACTGCGACATCCTCTTCCGCAGCGGCCTTCTCCTTGAAAGCGCCGCCGTTTCCAGCTCCTCCAAAAGAGAAGCCATCCGCTCCGCATCGCGAAACCTAATCACCCGGTTGCAAATCGGGTCGCCCGAGTCCAAAACCTCCGCGATGGACACCCTATTGGGCCTCCTTCACGAAGACGACAAAAATGTTACCATTGCTGTTGCGCAGGGCGTCGTTCCCGTGCTCGTGCGCCTGCTCGATTCACCCTCCGACATGAAGGAGAAAACGGTCGCTGCCATCGCCAAAGTTTCCACAGTTGAAAGCGCCAAGACTGTGCTCCTCGCCGAGGGTTTACTCCTTCTCAACCACCTTCTCCGAGTACTGGATTCTGGAAGCGGATTCGCGATTGAGAAATCATGCATCGCGCTTCAAGCGCTGAGTCTCACCAAGGACAACGCCAGAGCGATTGGCTCGCGCGGCGGAATCTCCTCTCTGCTGGAGATTTGCCAGGCTGGCACCCCCGGCGCGCAGGCCTCCGCAGCCGCCGTGTTGCGCAACCTCGCCGCGTTCGCGGAGATTAGGGACAATTTCGCGGAGGAGAATGCGGTGGTGGTTTTAGTTGCCTTGGCTTCCTCCGGAACTGCTTCGGCTCGTGAGAACGCTATTGGGTGTTTGTCGAATTTGATTTCCGAGGCTGACTCGGACGGTTTTTCGAATTTGAGGGTTATGGTGGTTAAGGAAGGTGGGGTTGAGTGTTTGAAGAATTACTGGGACTCGGGTACTCCAATTCCTAGTCTTGAAGTTGCAGTGAAGATGTTGCGGCATTTGGCTGAGAGTGCTGCAATTGGAGAGGTTCTGATAGGTGAAGGGTTTGGTCAGAGGCTTGTGGGGGTGCTGAACTGTGAGGTGCTGGCAGTGAGGATTGCCGCGGCGAGGGCGGTTGACGCTATAGGGTTGAACAGTGGCAGGGCGAGGAAAGAGATGGGGGAATTAGGGTGCGTTTCGGGTTTGATTAAGATGTTGGATGGGAAAGGTGCAGAGGAGAAAGAGGTTTCTGCAATGGCATTGTCGGTGCTGCTGATGCACCCTGCGAATAGGAAGGTTTTCCGCAAGGATGAAAGAGGGGTTGTGAGTGGAGTTCATTTGTTGAACCCTTCGTTGCAAGGATTGGATAAGAAGTACCCTGTTTCGTTGCTCGCTTCGTTAGTGCATTCCAAGAGTTGCAGAAAGCAGATGGTAGCAGCAGGGGCTTGTGTATATACGCAGAAGCTTGTGGAGATGGATGTGCCGGGATCAAAGAAACTCTTGGAGAGTCTCGGGCGTGGAAAGATTTGGGGTGTTTTTTCAAGACCCTAG 1821 0.542 MKAAPNVPHASAFHAPNPSHYTRLLFSCSSTKPSFPQRFEAKGKTAKMKDSAETDPIAESLNLLSTLLDSELPSVTNFKGKWSLAGVKLTHLQTHLTDFSAEFPNASTTNPLSLHLLHSISHTLHEAVLLARTCQPQHLPNGKLKTQSDLDSLLATLDRHVTDCDILFRSGLLLESAAVSSSSKREAIRSASRNLITRLQIGSPESKTSAMDTLLGLLHEDDKNVTIAVAQGVVPVLVRLLDSPSDMKEKTVAAIAKVSTVESAKTVLLAEGLLLLNHLLRVLDSGSGFAIEKSCIALQALSLTKDNARAIGSRGGISSLLEICQAGTPGAQASAAAVLRNLAAFAEIRDNFAEENAVVVLVALASSGTASARENAIGCLSNLISEADSDGFSNLRVMVVKEGGVECLKNYWDSGTPIPSLEVAVKMLRHLAESAAIGEVLIGEGFGQRLVGVLNCEVLAVRIAAARAVDAIGLNSGRARKEMGELGCVSGLIKMLDGKGAEEKEVSAMALSVLLMHPANRKVFRKDERGVVSGVHLLNPSLQGLDKKYPVSLLASLVHSKSCRKQMVAAGACVYTQKLVEMDVPGSKKLLESLGRGKIWGVFSRP* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1690 606 Gene3D - 420 592 IPR011989 -
Pvu9g1690 606 SMART arm_5 221 260 IPR000225 GO:0005515
Pvu9g1690 606 SMART arm_5 475 516 IPR000225 GO:0005515
Pvu9g1690 606 SMART arm_5 304 344 IPR000225 GO:0005515
Pvu9g1690 606 SMART arm_5 345 385 IPR000225 GO:0005515
Pvu9g1690 606 SUPERFAMILY ARM repeat 194 528 IPR016024 -
Pvu9g1690 606 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 232 273 IPR000225 GO:0005515
Pvu9g1690 606 Gene3D - 144 276 IPR011989 -
Pvu9g1690 606 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 53 604 - -
Pvu9g1690 606 Gene3D - 277 419 IPR011989 -
Pvu9g1690 606 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 53 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1690 Pvu-Chr9 23841847 23844091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1690 205 417 U-box Gene Family AT2G23140 27.969 1.74e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1690 - - pvu:PHAVU_009G163700g 1087.4