Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1685 ATGGAAAGGCTAAATTTTATAAAAAATGGAGTGAGTAGTTTGCCTCCAGGTTTTCGTTTCCAGCCAACAGATGAAGAACTTGTGTTTCAGTACTTGAAATGTAAGATCTTCTCCTGCCAGTTGCCTGCTTCAATCATTCCTGAGATCAATGTCAGCAAGTATGATCCCTGGGATTTGCCAGGAAATTGTGATGATGAAAAAGAGAGGTACTTTTTCAGCTCCAAGGAGGCCAAGTACCGAAATGGAAATCGTATGAACCGAACCACAAACTCTGGCTATTGGAAGGCAACGGGATCAGACAAAAAGGTTTCATCGTCAATAAATAATGGCATTTCCGGGTTAAGAAAGACTCTTGTATTTTATGAAGGAAAATCTCCAAACGGCTCCAGAACTGAATGGCTCATGCATGAATATCGACTCCTCAGTGTGGAAACTAGTGCTTCCAAACCAATCCAAGAGATAGGGGATTGGGTTCTGTGTCGCATATTCATCAAGAAAAGAAGCATAGAAAGTGATAACAACACTACTCCTCCCAGACAGAAGAATGCAGTGACGAATAATGTTGAGGTGGCTGAGCCAAGATTCTTTGAGTTTTTTAGTGTTCATCACAATTCAGTTCCCGCTCCTATACATTCTTCTACACTCTCATCTTGTTCAAGTTCCAATAACGTTGAAGAGGTCTCTTCTCCTAACCACGAACAAACAAGCGACTAG 714 0.4132 MERLNFIKNGVSSLPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEINVSKYDPWDLPGNCDDEKERYFFSSKEAKYRNGNRMNRTTNSGYWKATGSDKKVSSSINNGISGLRKTLVFYEGKSPNGSRTEWLMHEYRLLSVETSASKPIQEIGDWVLCRIFIKKRSIESDNNTTPPRQKNAVTNNVEVAEPRFFEFFSVHHNSVPAPIHSSTLSSCSSSNNVEEVSSPNHEQTSD* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1685 237 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Pvu9g1685 237 ProSiteProfiles NAC domain profile. 14 165 IPR003441 GO:0003677|GO:0006355
Pvu9g1685 237 MobiDBLite consensus disorder prediction 213 237 - -
Pvu9g1685 237 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 236 - -
Pvu9g1685 237 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Pvu9g1685 237 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Pvu9g1685 237 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1685 Pvu-Chr9 23764618 23766881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1685 1 168 NAC Transcription Factor Family AT5G13180 66.071 6.06e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu9g1685 NAM 3.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1685 - - gmx:100527806 377.481