Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1638 ATGTCAAAGTATCAAGGTGAAGAAGAGATGAGAAAAGCACCAAAGGGGCAATTCGTTGTTTACGTGGGGGAAGAACTAACAAGATTTACCTTACCACTGTCTTACTTGAAGAACCCTATTTTTCAGCAACTCTTGAAGAAATCTGCAGAGGAGTACGGATACAGTGACTCAAGAGGCATAGTCCTTCCCTGTGATGAATCAACCTTCCAAAACTTCATCAACTCCAAGCTCAGGGTATGCTAG 243 0.4239 MSKYQGEEEMRKAPKGQFVVYVGEELTRFTLPLSYLKNPIFQQLLKKSAEEYGYSDSRGIVLPCDESTFQNFINSKLRVC* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1638 80 Pfam Auxin responsive protein 10 74 IPR003676 GO:0009733
Pvu9g1638 80 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 76 IPR003676 GO:0009733
Pvu9g1638 80 PANTHER INDOLE-3-ACETIC ACID-INDUCED PROTEIN ARG7-LIKE 3 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1638 Pvu-Chr9 23016904 23017664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1638 5 70 Calmodulin-binding Proteins AT5G20810 43.939 1.75e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1638 K14488 - cic:CICLE_v10026926mg 102.449