Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1634 ATGGGTAGATCTCCTTGTTGTGAGAAGGAACACACAAACAAAGGAGCTTGGACCAAAGAGGAAGACGAACGCCTCATCAACTACATCAAACTCCATGGTGAAGGCTGTTGGAGATCCCTCCCCAAAGCTGCTGGCTTGCTCAGATGTGGCAAGAGTTGCAGACTCAGATGGATAAATTACCTCAGACCTGATCTCAAGAGAGGCAACTTCACTGAAGATGAAGACGAACTCATCATTAACCTCCACAGCTTACTAGGAAACAAATGGTCTTTGATTGCCGCAAGGTTGCCCGGAAGAACCGATAACGAAATCAAAAACTATTGGAACACTCACATCAAGCGGAAACTCTACAGCCGCGGAATCGACCCGCAAACCCATCGACCACTCAACGCCGCCTCCGCCACTCCGGCAACCGCCGCGGTCCCGCCTCCCTCCCCCGCCGCTGTCCCTGTGGCAACGTCGTCATCCAACAAAAAAATAAACAGCGACACCGTTAGCAGCTCCAACACGCTCGCCCATGATGTTGTTATTACCAACAACAGTAACAACAGCAACGGTTTTCAGTTGGTGAGCAATAGTGCTTATGCCAACACCGCAACGAAGGTTGGAACCGATGAAGATTCTAACAGCAGCAGCGGCGTTACCGTGGAAGAATCCTTCCCTCACCATCAACTCAACTTGGACCTTTCCATTGGCCTTCCCTCTTCTCACCAAGTTTCTTCTTCGGTGAACCCGGAAAAGTTGAAAGCGCAAGAGCATGATCAAAAACCGCATGTGTTGTACAAGTGGTATGGGAACATTACTGGCCAAGCTGTTTGTCTTTGTTACAGTCTAGGGCTTCAAAGCGGCCAAGCTTGTTATTGCAAAGGCGTGGGTGCTACTGCTACTACTACCATGGTTACTACAACTGCCACAGATAGTAATCTATATAGATTTTACAGACCCATGAATATTTAG 957 0.4859 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEDEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAASATPATAAVPPPSPAAVPVATSSSNKKINSDTVSSSNTLAHDVVITNNSNNSNGFQLVSNSAYANTATKVGTDEDSNSSSGVTVEESFPHHQLNLDLSIGLPSSHQVSSSVNPEKLKAQEHDQKPHVLYKWYGNITGQAVCLCYSLGLQSGQACYCKGVGATATTTMVTTTATDSNLYRFYRPMNI* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1634 318 CDD SANT 69 112 IPR001005 -
Pvu9g1634 318 PANTHER TRANSCRIPTION FACTOR MYB7 1 257 - -
Pvu9g1634 318 MobiDBLite consensus disorder prediction 150 165 - -
Pvu9g1634 318 CDD SANT 16 61 IPR001005 -
Pvu9g1634 318 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pvu9g1634 318 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pvu9g1634 318 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pvu9g1634 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pvu9g1634 318 MobiDBLite consensus disorder prediction 133 165 - -
Pvu9g1634 318 Gene3D - 68 135 - -
Pvu9g1634 318 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 257 - -
Pvu9g1634 318 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pvu9g1634 318 SMART sant 66 114 IPR001005 -
Pvu9g1634 318 SMART sant 13 63 IPR001005 -
Pvu9g1634 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pvu9g1634 318 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Pvu9g1634 318 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1634 Pvu-Chr9 22964840 22966499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1634 1 235 MYB Transcription Factor Family AT4G09460 59.149 1.51e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu9g1634 Myb_DNA-binding 4.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1634 K09422 - gmx:778033 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2868 2 44295291 44296750 Pvu9g1634 9 22964840 22966499 PCT