Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1615 ATGGAAGATGCAAGTTTCAACCTTCCTCCTGGGTTTTTCTTCTCTCCAACTGATGAAGAACTCGTTCTTCACTTTCTCTATTGCAAGGCTTCTCTTATTCCATGTCATCCCAACATAATCCCAGACCTCGATTTCTCTCGGCTTCATCCTTGGGAACTAAATGGTAAGGCTTTGTTAAGTGGGAATCAGTACTATTTCTTTACCAAAGTGAATGAAAACAGAACAATGGAAAATGGGTGTTGGAAGGAAATAGGTGTCACTGAACCTATATTTTCAACTTTTGACGAGAAAGTGGGAACGAAGAAATACTTGGTATTCCACATTGGTGAAGAAGCTCCACATGGTACTGAAACCAATTGGGTAATGCAAGAATATCATATATGTTCCTCTGGGTTTGACACTGCGTCCTATAGAAGTTCTAGGAGAAGAAGAAAACATGATCAAAGTTGGAGCAAGTGGGTTTTGTGCAGAGTTTACGAGAAGATGAGGTCTGAACAAGGTGTAAACAGCTATAGCGATGATGACGATGAGAGTGGATCAGAGCTTTCATGGCTAGATGAAGTTTATCTGTCCTTGGATGATGATCTGGAAGAAATTGTCATGCCTAATTAG 612 0.4036 MEDASFNLPPGFFFSPTDEELVLHFLYCKASLIPCHPNIIPDLDFSRLHPWELNGKALLSGNQYYFFTKVNENRTMENGCWKEIGVTEPIFSTFDEKVGTKKYLVFHIGEEAPHGTETNWVMQEYHICSSGFDTASYRSSRRRRKHDQSWSKWVLCRVYEKMRSEQGVNSYSDDDDESGSELSWLDEVYLSLDDDLEEIVMPN* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1615 203 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Pvu9g1615 203 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 200 - -
Pvu9g1615 203 Gene3D NAC domain 17 165 IPR036093 GO:0003677|GO:0006355
Pvu9g1615 203 ProSiteProfiles NAC domain profile. 8 161 IPR003441 GO:0003677|GO:0006355
Pvu9g1615 203 PANTHER NAC TRANSCRIPTION FACTOR 56 2 200 - -
Pvu9g1615 203 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1615 Pvu-Chr9 22688263 22689370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1615 7 166 NAC Transcription Factor Family AT1G61110 40.237 1.39e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu9g1615 NAM 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1615 - - gmx:100170711 358.992