Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1613 ATGAAGAAACAAGGGTGTGAGGTTGAGGCAACAGACATCAACTACAGGATCCGTACAAAGGCAACAGAGCAACCTTCTAAAATCTTCAGCAAATTTCTACAATTGAATAGGGAAGAAGATGGTCGTGAAGCAGAAGATGAAGAAAAAACTGAACAAAGATCATGCAGTGGAGTTAGGCATGTCCTCAAGAACGTGAATTGCATAGCAAAGCCACGGGAAATTCTGGCAATTGTTGGGCCAAGTGGGGCTGGGAAATCATCCCTTCTTAAAATCCTAGCTGGTAAAGCTAGTTCACAAAGTGGGTGTATCTTGGTGAATCAAGAACCTGTGGATAAAGTTCAGTTCAAAAAAATGTCAGGGTATGTTACACAAAAGGATACCTTGTTTCCCTTACTTACGGTTGAAGAAACTATAATGTTTAGTGCAAAGCTAAGGTTACGTCTTCCTCAAGAACAAATATGCTCCAAGGTCAAGTCACTGATTCTAGAGCTTGGTCTTAGCCATGTTGCTAGGACTAGAATTGGAGATGACAGGGTCCGTGGCATATCTGGTGGTGAGAGGCGTCGAGTTTCCATTGGTGTTGAAGTCATACATGATCCAAGGGTACTGATTTTGGATGAACCAACTTCAGGGCTTGATAGTACCTCAGCTTTGCAAATAATTGATATGCTTAAAGTCATGGCTGAATCTAGGGGCCGAACTATAATCCTAACTATCCACCAACCCGGGTACAGAATAGTGAAGTTGTTCAACTCAATACTGTTATTGGCTGATGGTATTGTGTTGCACCATGGCACTGTGGATTTGCTGGGTGTAAATCTAAGGCTAATGGGTTTAGAGCTTCCTCTTCATGTTAATGTGGTTGAGTTTTCCATTGATTCCATCAAGACCATTCAGCAACAAAAAAAATGTCAGCAGGTTCAGCTAGAAGCACCGTGGCTATTACCAAGGACAATGCTACAAAAGAAATGTGGTGATCAAGGTGAGAGCAGAAGTGGTAAGTTTACTTTGCGACAGCTCTTTCAACAATCCAAGTTAATTGATGTAGAAATCATTAGTGCGGGAATGGATATCACTTGTGATTTTGCAAATTCTGGATTGAGAGAAACTATGATTCTCACTCATAGATTTTCCAAAAACATCCTACGCACAAAGGAACTCTTTGCATGCAGGACAATTCAAATGCTGGTTTCTGGACTTGTTTTGGGCTCAGTCTTTTGTAACAAGGATGGTCTAGTGGGAGCGAAAGAAAAAGTGGGTCTATTTGCTTTCGTTTTAACGTTTATGTTATCGAGCACCACCGAAGCTCTACCTATTTTTCTGCAAGAAAGGGATATTCTAATGAAAGAAATCTCTAATGGAAGCTACAGAGTTTCATCTTATGCTATCGCCAATGGCCTAGTTTACTTGCCATTTTTGCTCATACTTGCCATTTTATTCACAGTGCCTCTGTACTGGCTTATTGATCTCAACAGGAATTTTTCGGCATTTTTGTACTTTTTGATGCTAATTTGGCTAATTCTTTACACTGCAAATTCGGTTGTGGTATGTTTCAGTGCTGCAGTGCCTAATTTCATTGTTGGGAATTCAATGATCGGTGGTGCCATCGGTTCGTTTCTTCTGTTCTCTGGCTACTTCATATCAAAACATGAAATTCCAAGTTACTGGATTTTCATGCATTATATATCTCCGTTTAAGTATCCCTTTGAAGGGTTTCTGATAAATGAGTTCTCCAACTCAAAGAAGTGCTTGGAGTACTTGTTTGGGGCATGTGCGGTGAGGGGAGAGGATGTACTTAAAGAAGCGCAGCTTGGAGGGCAGACTAGTAGATGGAAGAATGTTGGGGTGATGGTGTGCTTCATCCTGGTTTCCAGGTTCATTTGTTTTGCAATTCTTAGGTACAGATGTTCACAAGTAGTTATCCTAAAAGTATGA 1935 0.4078 MKKQGCEVEATDINYRIRTKATEQPSKIFSKFLQLNREEDGREAEDEEKTEQRSCSGVRHVLKNVNCIAKPREILAIVGPSGAGKSSLLKILAGKASSQSGCILVNQEPVDKVQFKKMSGYVTQKDTLFPLLTVEETIMFSAKLRLRLPQEQICSKVKSLILELGLSHVARTRIGDDRVRGISGGERRRVSIGVEVIHDPRVLILDEPTSGLDSTSALQIIDMLKVMAESRGRTIILTIHQPGYRIVKLFNSILLLADGIVLHHGTVDLLGVNLRLMGLELPLHVNVVEFSIDSIKTIQQQKKCQQVQLEAPWLLPRTMLQKKCGDQGESRSGKFTLRQLFQQSKLIDVEIISAGMDITCDFANSGLRETMILTHRFSKNILRTKELFACRTIQMLVSGLVLGSVFCNKDGLVGAKEKVGLFAFVLTFMLSSTTEALPIFLQERDILMKEISNGSYRVSSYAIANGLVYLPFLLILAILFTVPLYWLIDLNRNFSAFLYFLMLIWLILYTANSVVVCFSAAVPNFIVGNSMIGGAIGSFLLFSGYFISKHEIPSYWIFMHYISPFKYPFEGFLINEFSNSKKCLEYLFGACAVRGEDVLKEAQLGGQTSRWKNVGVMVCFILVSRFICFAILRYRCSQVVILKV* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1613 644 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 634 - -
Pvu9g1613 644 Pfam ABC-2 type transporter 370 577 IPR013525 GO:0016020|GO:0140359
Pvu9g1613 644 SMART AAA_5 71 268 IPR003593 -
Pvu9g1613 644 Pfam ABC transporter 62 210 IPR003439 GO:0005524
Pvu9g1613 644 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524
Pvu9g1613 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 269 IPR027417 -
Pvu9g1613 644 Gene3D - 48 310 IPR027417 -
Pvu9g1613 644 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 634 - -
Pvu9g1613 644 Pfam ABC-2 type transporter 240 316 IPR043926 GO:0140359
Pvu9g1613 644 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 283 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1613 Pvu-Chr9 22666822 22668756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1613 60 301 Calmodulin-binding Proteins AT2G36910 23.506 2.43e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1613 K05681 - gmx:121172640 1055.82