Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1602 ATGAAGTTAATCGGCGACGGAGCCGATGGCCGGAAGGTACTCGTCGGGGTAAAATTAGATCCTTGCAGCCGCGAATTGCTGACGTGGGCGCTCGTCAAGGTGGCTGAGTCCGGTGACCTCGTCATTGCGCTTCACGTCCTCGACTCAATCACTGAGGGAACGGCATCGCTGTTATCTCTCGTGAAAACTTTCGACTCCGTTCTCGCCGTTTATGAAGGCTTCTGCAACCTAAAACAGGTTGGTCTGAGGCTTAAAGTGTGTCGCGGTGACTCGGTTCGGAAGGTTCTGGTGCAAGAGGCCAAGACGTTTGGAGTTTCCACCGTGATTTTGGGAACTTCTAAGTCTCATCACACTATTCGTTCTTCCGCGTGGGTTGCGAAGTACTGTGCGAAGAAATTGCCGAAGTGTATCTCTGTCTTCTCTGTAGATAATGGCAAAATTGCTTTCCGGAGAGAAGCAAATGGAAATTGTGGTGATCGAGAAAAATCACCCGAAGGGTCAAGTTTGTCGCCAAAGGCGTTGGTGGTTTATTCAAACAAGGACATAAAGAGTTGTGGAAGTTGTGCATTGCAAGAGATTTCTGGGACTGTGTTTGAGCGAGGGTTGTGTGATGATGTTGAGAAGGGTGATTCGCTTGCTTTGGTTCCGTTTAAGAAGCTTGATGATGGTTCTTGTTTTTCCGTTGTGGTGGATAACACGAAGCATAAACCTGGCTGGTCACTGCTTCGCAATGTGTTTCATCACAAGAAGCATTCCCCAAAATCTTCCACGAAAAATACATATATTTTCCAAAGGGCTTTGCGGCAGCCGAATTTTCATTCTTCAGCTGTAGTCCATCCGGATCATAAGCAAATTAGTATTGAGCAGATTGATGATTCCCCTCTCGATGGGGTGAGTGGTGCCATTGTACCATATGGATCTGCTACTATTGTTACCCTTCCCTCCATTAGCTATAAGTCGGGTAACCTACCTGATGAATTGTTGATATTACAAGAAAAGTACTCATCTTCTTGCACATTACATAGTTTGCAGGAGCTTGTATCTGCAACCTCCAACTTCGCACCAGAGAATTTGGTTGGCAAAGGTGGTTGTAGTTATGTTTACAGAGGATGTCTTCCAGATGGCAAGGAATTGGCGGTGAAAATTTTGAAGCCATCTGAAAACGTGATAAAGGAGTTTGTTCAGGAAATTGAGATCATTACAACTTTGCGCCACAAGAACATAATATCTATATCTGGCTTTTGCTTAGAGGGCGACCATTTGCTACTAGTTTACGATTTTTTGTCAAGGGGAAGCCTAGAAGAAAACCTTCACGGCAACAAGGCGGACTGTAGTGCATTTGGTTGGCAAGAAAGGTACAAGGTGGCTGTGGGTGTAGCTGAGGCACTGGATTATCTGCATAATGGCTGTGCTAAGGCTGTTATCCACAGGGATGTGAAATCTTCTAATATCCTTCTTTCAGATGATTTTGAGCCTAAGCTTTCAGATTTTGGACTGGCTAGTTGGGGTTCATCTTCTTCCCATATTACTTGTACCGATGTAGCTGGAACTTTTGGATACCTCGCACCTGAGTATTTTATGCACGGTAGAGTGACTGATAAAATTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTATCAAATAGGAAGCCCATTAACAATGAATGTCCAAAGGGACAGGAGAGCCTTGTTATGTGGGCAACACCAATCCTTAAAGGTGGGAAGGTTACCCAGTTGCTTGATCCAAACCTAGGCATTGAATACGATGATTGCCAGATGAAGAGAATGGTTTTGGCCGCTAGTCTCTGCATTAGACGGGTACCTAGACTGCGGCCTCAAATCAGCCTTATATTGAAACTTCTGCGTGGTGATGAAGAGGTGACAAGATGGGCAGAACAAGAAGCTAATGCACCACAGGAACTTGATGGTTTTGACGAGGAACCAGTTCCAACTAACATACAGTCCCACCTGAACCTTGCTTTGATGGACCTGGAGGATGATGCGGTTTCTATCAGTAGCACTGAGCAGAGTGTATCTTTGGAGGACTATTTGCAGGGAAGATGGAGTCGCTGTTCAAGTTTTGACTGA 2094 0.4513 MKLIGDGADGRKVLVGVKLDPCSRELLTWALVKVAESGDLVIALHVLDSITEGTASLLSLVKTFDSVLAVYEGFCNLKQVGLRLKVCRGDSVRKVLVQEAKTFGVSTVILGTSKSHHTIRSSAWVAKYCAKKLPKCISVFSVDNGKIAFRREANGNCGDREKSPEGSSLSPKALVVYSNKDIKSCGSCALQEISGTVFERGLCDDVEKGDSLALVPFKKLDDGSCFSVVVDNTKHKPGWSLLRNVFHHKKHSPKSSTKNTYIFQRALRQPNFHSSAVVHPDHKQISIEQIDDSPLDGVSGAIVPYGSATIVTLPSISYKSGNLPDELLILQEKYSSSCTLHSLQELVSATSNFAPENLVGKGGCSYVYRGCLPDGKELAVKILKPSENVIKEFVQEIEIITTLRHKNIISISGFCLEGDHLLLVYDFLSRGSLEENLHGNKADCSAFGWQERYKVAVGVAEALDYLHNGCAKAVIHRDVKSSNILLSDDFEPKLSDFGLASWGSSSSHITCTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNECPKGQESLVMWATPILKGGKVTQLLDPNLGIEYDDCQMKRMVLAASLCIRRVPRLRPQISLILKLLRGDEEVTRWAEQEANAPQELDGFDEEPVPTNIQSHLNLALMDLEDDAVSISSTEQSVSLEDYLQGRWSRCSSFD* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1602 697 SMART serkin_6 353 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1602 697 CDD USP_Like 12 137 - -
Pvu9g1602 697 ProSiteProfiles Protein kinase domain profile. 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1602 697 Pfam Universal stress protein family 11 134 IPR006016 -
Pvu9g1602 697 Pfam Protein kinase domain 356 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1602 697 Gene3D Phosphorylase Kinase; domain 1 323 427 - -
Pvu9g1602 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Pvu9g1602 697 Gene3D HUPs 10 141 IPR014729 -
Pvu9g1602 697 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 115 - -
Pvu9g1602 697 SUPERFAMILY Protein kinase-like (PK-like) 334 623 IPR011009 -
Pvu9g1602 697 Gene3D Transferase(Phosphotransferase) domain 1 428 640 - -
Pvu9g1602 697 PANTHER OS01G0253100 PROTEIN 7 691 IPR045271 GO:0004714|GO:0006468
Pvu9g1602 697 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1602 Pvu-Chr9 22508153 22511749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1602 336 624 Trihelix Transcription Factor Family AT1G68690 45.847 4.41e-77 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu9g1602 Pkinase 7.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1602 - - gmx:100815722 1232.62