Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1581 ATGAAGGGTGAATTAGAGTTGCCACCTGGGTTCAGGTTTCACCCCACGGATGATGAATTGGTGAATCACTATCTGTGTAGAAAATGCGCTGGTCAACCAATTTCTGTTCCTATCATCAAAGAGGTCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATGGGATTTTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGCAAATACCCCAACGGCTCACGGCCGAACCGCGCCGCCGGAAGTGGGTATTGGAAGGCCACCGGCGCCGATAAACCGATCGGAAAGCCGAAGGCGCTCGGGATCAAGAAAGCTCTGGTTTTTTACTCGGGAAAAGCCCCGAAAGGAGAGAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCAGCCTCCAAGAAAAACAACAACCTAAGGCTTGACGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATTCAACACGGGGGCACAGAAAATGGAGGCTGGGTTTGTTGATAATTTCGATCAAGAGATGAAGCCGGAGATTGAGAAGCTTAGGAATGAGCAATTGTTTATGGAGAGTTCAGAGTCGATGCATAGAGTGCAGACGGAGTCGAGCGGTTCAGAGCAGGTGGTTTCGGCGGAGGTGAGGTGGGAGAGGGAGGTGCAGAGCCACCCCAAATGGAATGACATTGGGCTACAGCTTGAAAACGCCTTTGATTTTGAATACAATTACTTTGACAATAATAACCTTTCGGTGGATGACCCTTTTGGGAATGTTGAGTATCAAATAGGCCACGTGTCTCCCTTGCAGGACATTCTCATGGAAGCCCTGTTGATGTGA 861 0.4808 MKGELELPPGFRFHPTDDELVNHYLCRKCAGQPISVPIIKEVDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYSGKAPKGEKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKFNTGAQKMEAGFVDNFDQEMKPEIEKLRNEQLFMESSESMHRVQTESSGSEQVVSAEVRWEREVQSHPKWNDIGLQLENAFDFEYNYFDNNNLSVDDPFGNVEYQIGHVSPLQDILMEALLM* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1581 286 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Pvu9g1581 286 PANTHER NAC TRANSCRIPTION FACTOR 56 5 261 - -
Pvu9g1581 286 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Pvu9g1581 286 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 261 - -
Pvu9g1581 286 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Pvu9g1581 286 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1581 Pvu-Chr9 22214660 22216369 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1581 1 281 NAC Transcription Factor Family AT1G01720 59.794 1.74e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu9g1581 NAM 2.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1581 - - gmx:100814504 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2918 2 44711971 44713213 Pvu9g1581 9 22214660 22216369 PCT