Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1580 ATGAAGGGTGAATTAGAGTTGCCACCTGGGTTCAGGTTTCACCCCACGGATGATGAATTGGTGAATCACTATCTGTGTAGAAAATGCGCTGGTCAACCAATTTCTGTTCCTATCATCAAAGAGGTCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATGGGATTTTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGCAAATACCCCAACGGCTCACGGCCGAACCGCGCCGCCGGAAGTGGGTATTGGAAGGCCACCGGCGCCGATAAACCGATCGGAAAGCCGAAGGCGCTCGGGATCAAGAAAGCTCTGGTTTTTTACTCGGGAAAAGCCCCGAAAGGAGAGAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCAGCCTCCAAGAAAAACAACAACCTAAGGCTTGACGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATTCAACACGGGGGCACAGAAAATGGAGGCTGG 524 0.4905 MKGELELPPGFRFHPTDDELVNHYLCRKCAGQPISVPIIKEVDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYSGKAPKGEKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKFNTGAQKMEA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1580 174 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Pvu9g1580 174 PANTHER NAC DOMAIN-CONTAINING PROTEIN-RELATED 5 165 - -
Pvu9g1580 174 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Pvu9g1580 174 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Pvu9g1580 174 PANTHER NAC TRANSCRIPTION FACTOR 56 5 165 - -
Pvu9g1580 174 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1580 Pvu-Chr9 22201087 22201775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1580 1 171 NAC Transcription Factor Family AT5G08790 81.395 4.37e-104 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu9g1580 NAM 5.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1580 - - gmx:100814504 355.14