Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1557 AAAAAACAAGCAGCAATAATCAAAGAAGAAAACTTTAGTGTCTTACGAAACACTGATGAAGAATCGACGATAGGGAATGCTATGAATTTCCCTTATCTTACTGGCATCTCCGAACGTGTCGTTGCTCCTCTATATGCCACAGTTCCCGCCACAATTATCAGGGGCAATAAGGCGGAGAGTTTTTCAATTGAAGGGCGTAATCTGAGATTCTCATTCACGACGAAGCAAACGCAGGATGTACCGGTTCTTAGGGATTGTTCGATTCGCATTCCTTGCGGGCAGTTTTGGATGCTACTTGGGCCCAATGGGTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTCTTGACCCCAACTTCAGGAACAGTGAATGTGAATGGACCTAAAAGTTTCGTTTTCCAAAATCCAGATCATCAGGTGGTGCTGCCTACTGTAGATGCTGATGTTGCATTTGGTCTTGGTAAGATCGATTTAACTCACAATGAAGTCAGATCTAGGGTGTCGAGAGCTTTGCATGCTGTAGGCCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATAGCTGGTGCTCTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTCGGGGTTATCAAAGCTGTCAGGAACTCTGTGGATACCTCTGCAGAAGTTACGGCATTATGGGTCACCCATCGTTTGGAAGAACTAGAGTATGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTTGTCATGCAAGGAGATGCTGCTAGCATTAGGAGTTTCATTGAAGCCAGACAATCTGCTTATATAAACCAGATTAATTCTTAA 879 0.4448 KKQAAIIKEENFSVLRNTDEESTIGNAMNFPYLTGISERVVAPLYATVPATIIRGNKAESFSIEGRNLRFSFTTKQTQDVPVLRDCSIRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVNVNGPKSFVFQNPDHQVVLPTVDADVAFGLGKIDLTHNEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSVDTSAEVTALWVTHRLEELEYADGAIYMEDGKVVMQGDAASIRSFIEARQSAYINQINS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1557 292 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 60 291 - -
Pvu9g1557 292 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 60 291 - -
Pvu9g1557 292 SMART AAA_5 92 265 IPR003593 -
Pvu9g1557 292 Gene3D - 58 291 IPR027417 -
Pvu9g1557 292 Pfam ABC transporter 83 215 IPR003439 GO:0005524
Pvu9g1557 292 CDD ABC_cobalt_CbiO_domain1 64 265 IPR015856 GO:0005524|GO:0016020|GO:0055085
Pvu9g1557 292 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524
Pvu9g1557 292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 280 IPR027417 -
Pvu9g1557 292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 288 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1557 Pvu-Chr9 21938847 21947751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1557 63 270 Calmodulin-binding Proteins AT2G36910 30.088 5.86e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1557 - - pvu:PHAVU_009G150700g 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1557 9 21938847 21947751 Pvu9g1557 9 21938847 21947751 ECH