Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1555 ATGCCCACTTGGTGGGGTAAAAAGTCCAGCAAGAGCAAGGACCAAGAGGACCACCACCCACATGGCGGCGGCGGCGGCGGAACCAGCGTTCTTCAATTCAACTTCATCAAGCCCAAGACCAGGCCCAACAAGAGCTTCGAAGAACCTGCGCACGTCCGGAATTCCCCACGCGCCACCCGCGATTTCACTCTCTCCGCCGCCGACTCCGACGAGAAGCGGGGGCTCCCCTTGCCTCGCCCCTCCGTCTCCTCCATCCAAAGCTTCGGCAACGACCAAGGTCTCGTCTTCGGATCTGCCTCTGTTTCGGGCTCTAGCGTCAGCTCCAATGGCTCCTACGAGGATCACCCCACATATCACTCTCAGATTACTGCTGCTAGAGGACAAGGTGAAGTGAAGTTCCATGTGAGGTCTAAAAGCCCAGGTCCTGGGTCAAGAGGGCCCACCAGCCCAACATCACCTCTTCATCCGAAGTTGCTTATTTTGAGTCTTGACTCTCCTACTGGCAGGCAAGAAGATGGAAGGGGTGAATGCCATCCGTTGCCTCTTCCACCCGGCTCTCCTACCAGCCCTTCTTCTTCTCTTTCCAGCGCTAGAGCAAATGGAGTGGCGGAACACACTACCGGTAACCTTTCCAAGTGGAAGAAAGGAAAGCTTCTAGGACGGGGAACATTTGGGCATGTTTACCTGGGATTCAATAGTGATAGTGGGCAATTATGTGCAATAAAGGAAGTCAGGGTTGTCTGTGATGACCAAACATCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATCAATTTGCTCAGTCAGCTTTCACATTCAAACATTGTTCAATACTATGGGAGTGATTTGGGAGAAGAAACACTCTCCGTTTATTTGGAATACGTCTCTGGTGGTTCTATTCACAAATTACTTCAGGAATATGGGGCCTTCAAAGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGTCTTTCCTATCTCCATGGGAGAAATACAGTGCATAGGGATATCAAAGGGGCTAACATATTAGTTGATCCTAATGGTGAAATCAAGCTGGCCGACTTTGGAATGGCTAAACACATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACAAATGGCTATAGCCTTCCTGTTGATATATGGAGCTTGGGTTGCACAATTCTTGAAATGGCAACATCAAAGCCTCCCTGGAATCAATATGAAGGGGTAGCTGCAATATTTAAAATCGGTAACAGCAGAGATATGCCTGAAATCCCTGATCATCTCTCAAGCGAGGCAAAGAATTTCATTCAGCTATGCTTACAAAGAGATCCATCAGCCCGTCCAACAGCCCAGAGGTTACTAGAGCATCCCTTCATTCGAGATCAATCAGCAACAAAAGCTACAAATGTCAGAATAACCAGGGATGCTTTCCCCTGCATGTTTGATGGAAGTCGGACTCCGCCGCCAGTTTTAGATCATTCCAATAGAACAAGTATAAATTCATTTGATGGAGATTATGCAACAAAGCCAGTTCCTGTTACTTCACGGGCAGTGAGGAGCCCAAGAGATAACACAAGAATGATTACATCTTTACCAGTATCTCCCTGTTCAAGTCCATTGCGACAGTATGGGCCAGCCCACAAGAGCTGTTTTCTTTCTCCTCCTCATCCAAGTTACACTTTGATGGGGCAAAATACCCTCCCGTCATATCCAGTGAGATCAAATGCAACATTCGCTCTTGATCCTTTTCAGGAAAAATCTTTTTACAAAGCCCACACACCCGGTGGATCCCCTAGAAGACTCATTTGA 1839 0.4747 MPTWWGKKSSKSKDQEDHHPHGGGGGGTSVLQFNFIKPKTRPNKSFEEPAHVRNSPRATRDFTLSAADSDEKRGLPLPRPSVSSIQSFGNDQGLVFGSASVSGSSVSSNGSYEDHPTYHSQITAARGQGEVKFHVRSKSPGPGSRGPTSPTSPLHPKLLILSLDSPTGRQEDGRGECHPLPLPPGSPTSPSSSLSSARANGVAEHTTGNLSKWKKGKLLGRGTFGHVYLGFNSDSGQLCAIKEVRVVCDDQTSKECLKQLNQEINLLSQLSHSNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSSSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSRDMPEIPDHLSSEAKNFIQLCLQRDPSARPTAQRLLEHPFIRDQSATKATNVRITRDAFPCMFDGSRTPPPVLDHSNRTSINSFDGDYATKPVPVTSRAVRSPRDNTRMITSLPVSPCSSPLRQYGPAHKSCFLSPPHPSYTLMGQNTLPSYPVRSNATFALDPFQEKSFYKAHTPGGSPRRLI* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1555 612 PANTHER MAP KINASE KINASE KINASE 1 595 - -
Pvu9g1555 612 ProSiteProfiles Protein kinase domain profile. 213 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1555 612 Gene3D Transferase(Phosphotransferase) domain 1 210 488 - -
Pvu9g1555 612 SMART serkin_6 213 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1555 612 CDD STKc_MEKK1_plant 212 469 - -
Pvu9g1555 612 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 595 - -
Pvu9g1555 612 MobiDBLite consensus disorder prediction 134 207 - -
Pvu9g1555 612 MobiDBLite consensus disorder prediction 1 116 - -
Pvu9g1555 612 MobiDBLite consensus disorder prediction 189 207 - -
Pvu9g1555 612 Pfam Protein kinase domain 214 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1555 612 SUPERFAMILY Protein kinase-like (PK-like) 211 554 IPR011009 -
Pvu9g1555 612 MobiDBLite consensus disorder prediction 41 55 - -
Pvu9g1555 612 MobiDBLite consensus disorder prediction 80 116 - -
Pvu9g1555 612 ProSitePatterns Protein kinases ATP-binding region signature. 219 242 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1555 Pvu-Chr9 21926145 21932821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1555 1 532 MAP Kinase Kinase Kinase AT1G53570 57.838 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu9g1555 Pkinase 1.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1555 K04421 - gmx:100813122 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1555 9 21926145 21932821 Pvu9g1555 9 21926145 21932821 ECH
Pvu2g2798 2 43728152 43733883 Pvu9g1555 9 21926145 21932821 PCT
Pvu2g2991 2 45344775 45351256 Pvu9g1555 9 21926145 21932821 PCT