Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1550 ATGGCCCGAAGAAATTCCACTCCAGGGTTTCGGTTCCGGCCCACTGACGTTGAGTTGATTGAGTTTTTTCTGAAGAGGAAGGTTCGGGGTAAGGTAATTCCCAGCGGAGTAATTGCTGAGCTTGACTTGTACAAGTATGCTCCGTGGGATCTTCCAGATAAATCTGCCCTCCAGAGTGGGGATTTGGAGTGGTACTTCTTTTGTCCGAAGGGGAAGAAATATTCGACTGGAGGGAGGTTTAATCGGTCGACGGAGGTTGGGTACTGGAAGACTACTGGGAAGGATAGAGCGGTTGAACACAAGAATCGAGTTGTGGGGATGGTTAAAACTCTGGTTTTTCACACCGGTAAAGCCCCTAAGGGAGATCGGACTGATTGGGTTATGCATGAATTCAGAGTTGATGACAAGGAGATGGTTGACGAAGGCAGTTCGCAGGACTCCTATGTAATTTGTAGGATATTCCGAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATACGGTAAACCATATGATGAGAAAGAATGGGATACAGATGAGGAAATTGACTCTGTGCAATCTGAACGTGTTGCTTCTATGTCGACACCTGTTCCTATACAACCCAGTGAAAGTCATATTTCTATTGCAAATGACATCAATCCCTCTACAAGTGGATGTGCTGGATTGACCTCTGTATCATGTGCATCAAAGTTGATGCCTTCCTGCTCAGCATATTGTGTGCCTTCTAACAATCAAATTGACTCTGTGTCATGTGTATCAGAATTGATGCCCTCTTGCTCAGCACTACCTTTTTCTCCAAACTGTGCATTTGATTCTGTATCAGGTCTATCAAAAGTGACACCCTCTTGTTCAACAGTTCCTTTAACTCCAAACTATGATGTTGACTCTGTATCATGTGTATCAAAATTGATGCCCTCTTGCTCAGCATTTTCTTCTGCTCCAAACAGTGAAGTTGACTCTGTATCTGTATCAAAAATGCCTTCTTGCTTGCCACTTGCTTCAGCTCCAAACAATCTAGTTGACACTTTATCATCTGTATCAGAATTGATGCCCTCTTGCACGGCACCATCTCCAAACCATCAAGATGATGAAAACATTTTATCTTTGCTAGATTATTTCAAAGAAGATGACGACACAATGGCTGTGAATGAAAACAATGGAATTAAGAAGGTTGACCCTGATCAGGCGAACAATGCTGAATGCGCACCATGTTTGGATCCAAATGTGATTTTTGAGAACCTAGGAGACCTTGACAGCTTGGTTGGATTGGGTGAAGGCAGTTTTTCCTCTGGCCAGAAAAACGGACTTTCTACAAGCGATATGTTTTATACAGGTGGTGATTATATGCTTGGGTCTTGGGAACCCCAAGACTTTTTGGAGTTGACGGACCTAGCGGGGCCACAGCCCTGGCAGAATAAGCATGGAAGTTCTGGCGAATATAAGTAA 1446 0.4398 MARRNSTPGFRFRPTDVELIEFFLKRKVRGKVIPSGVIAELDLYKYAPWDLPDKSALQSGDLEWYFFCPKGKKYSTGGRFNRSTEVGYWKTTGKDRAVEHKNRVVGMVKTLVFHTGKAPKGDRTDWVMHEFRVDDKEMVDEGSSQDSYVICRIFRKEGPGPRNGAQYGKPYDEKEWDTDEEIDSVQSERVASMSTPVPIQPSESHISIANDINPSTSGCAGLTSVSCASKLMPSCSAYCVPSNNQIDSVSCVSELMPSCSALPFSPNCAFDSVSGLSKVTPSCSTVPLTPNYDVDSVSCVSKLMPSCSAFSSAPNSEVDSVSVSKMPSCLPLASAPNNLVDTLSSVSELMPSCTAPSPNHQDDENILSLLDYFKEDDDTMAVNENNGIKKVDPDQANNAECAPCLDPNVIFENLGDLDSLVGLGEGSFSSGQKNGLSTSDMFYTGGDYMLGSWEPQDFLELTDLAGPQPWQNKHGSSGEYK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1550 481 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Pvu9g1550 481 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Pvu9g1550 481 PANTHER PLANT NAC DOMAIN PROTEIN 1 463 - -
Pvu9g1550 481 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Pvu9g1550 481 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Pvu9g1550 481 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1550 Pvu-Chr9 21883166 21887652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1550 1 246 NAC Transcription Factor Family AT5G64060 47.967 5.15e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu9g1550 NAM 1.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1550 - - vun:114164401 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2794 2 43689095 43692582 Pvu9g1550 9 21883166 21887652 PCT