Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1538 ATGAGAAAACCCACTAAACCCATACCAACGTTCCTCCCAATCTCAATCCTCAGATCCACCCTCTTCCTCCTCATCCTCTCCATGGCTTCCCTCTTCTTCCTCTCCCTCCTCTTCTTCCTCAACCTCCACCCTCACTCCTCCGCCGTGGAGATTCACCGAGCCTGCAATGCCACGCGCTTCCCTCCCCAATGCCACGCCTCCCTCAGCCCTAGAGTCCCTCCCAATCCCACCCCTCTCCAAATCGTCCAATCCGCCCTCCGAGCCTCCTCCTCCAATCTCGTCACCGCGCGATCCAAGGTGCGCTCCATTGTAAGCGCCTCCGCGAACAACCGCACCCGCTTAACCAACGCAAAAAGCTGTCGCCAGGTCCTCCACTACTCCAGACACCGCACCAACCTCGCCAAAGCCGCACTCCTCCGCGGCGCCACCAAGGACGCGCGCGCCTGGATGAGCGCCTCCCTCGGCTACCAGTACGGCTGCTGGAACGGCCTCAAGTACATCAACCACACCGCGCTGGTCGCCGAAACGATGTCGTTCCTCGAGTCTCTCGTCACCCTCTCCAGCAACGCTCTCAGCATGATGGTCTCCTACGACATCTTCGGAAACGACACCGCATCGTGGAGGCCGCCAATGACGGAGCGCGACGGCTTCTGGGAGCCCTCCGGGACTCCGGGACTCGGGGCGCTACCCAAGATAGCGGAGAATTTGAAGGCGGACGCTGTGGTGTGTAAGGGTGGGGACTGTTACAAGACGGTGCAGGCGGCGGTTAACGCGGCGCCGGATAATGCGGAAGGGAGGTTTGTGATATATATAAAGGAAGGGGTTTATGAAGAGAAGGTGAGGGTTCCGTACAGGAAGAAGAATGTGGTGTTCTTGGGGGATGGCATGGGTAGGACTGTGATCACGGGATCTGCTAACGTGGCCCAGCCCGGCATCACCACTTACAGCTCTGCCACCGTTGGGGTTGCTGGGGATGGATTTATGGCAAAGGATCTCACGATTGAGAACACGGCTGGTGCTAATGCTCACCAAGCAGTGGCCTTCAGATCAGACAGTGATCTTTCTGTCATCGAAAACTGTGAATTCATAGGCAACCAAGATACTCTCTATGCTCATTCCCTGCGCCAATTTTATAAATCTTGCCGCATACTAGGCAACGTGGACTTCATCTTTGGGAACTCGGCAGCAATCTTCCAAGACTGTGAAATCCTAGTCCGGCCCCGGCAAGACAGACCAGAGAAGGGTGAGAACAATGCTGTTACTGCACACGGTAGGACAGACCCTGCTCAGTCAACAGGATTTGTTTTCCAGAACTGTTTGGTTAATGGTACCGAGGAATACATGGCATTGTATTATAGCAAACCTCAAGTTCACAAAAACTATCTGGGGAGGCCATGGAAGGAGTATTCTAGAACAGTTTTCATACATACATTCTTTGAAACCCTTATCACACCAGAGGGATGGATGCCATGGACGGGGGATTTTGCTTTGAACACGCTTTATTATGGGGAATTTGAGAACTCAGGACCTGGTTCAAATCTGACTCAGAGGGTGCCCTGGAGTAACCAGGTCCCAGCCGAGCACGTATTCTCTTACTCATATCAGAATTTCATTCAAGGAGATGATTGGTATCATCATTTCAGTCAGTAG 1650 0.5382 MRKPTKPIPTFLPISILRSTLFLLILSMASLFFLSLLFFLNLHPHSSAVEIHRACNATRFPPQCHASLSPRVPPNPTPLQIVQSALRASSSNLVTARSKVRSIVSASANNRTRLTNAKSCRQVLHYSRHRTNLAKAALLRGATKDARAWMSASLGYQYGCWNGLKYINHTALVAETMSFLESLVTLSSNALSMMVSYDIFGNDTASWRPPMTERDGFWEPSGTPGLGALPKIAENLKADAVVCKGGDCYKTVQAAVNAAPDNAEGRFVIYIKEGVYEEKVRVPYRKKNVVFLGDGMGRTVITGSANVAQPGITTYSSATVGVAGDGFMAKDLTIENTAGANAHQAVAFRSDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRILGNVDFIFGNSAAIFQDCEILVRPRQDRPEKGENNAVTAHGRTDPAQSTGFVFQNCLVNGTEEYMALYYSKPQVHKNYLGRPWKEYSRTVFIHTFFETLITPEGWMPWTGDFALNTLYYGEFENSGPGSNLTQRVPWSNQVPAEHVFSYSYQNFIQGDDWYHHFSQ* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1538 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 193 IPR035513 -
Pvu9g1538 549 SUPERFAMILY Pectin lyase-like 237 546 IPR011050 -
Pvu9g1538 549 Pfam Plant invertase/pectin methylesterase inhibitor 51 193 IPR006501 GO:0004857
Pvu9g1538 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 196 IPR035513 -
Pvu9g1538 549 TIGRFAM PME_inhib: pectinesterase inhibitor domain 30 192 IPR006501 GO:0004857
Pvu9g1538 549 SMART PMEI_2 46 193 IPR006501 GO:0004857
Pvu9g1538 549 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 28 545 - -
Pvu9g1538 549 Gene3D - 233 548 IPR012334 -
Pvu9g1538 549 CDD PMEI-like_3 54 194 - -
Pvu9g1538 549 Pfam Pectinesterase 239 541 IPR000070 GO:0030599|GO:0042545
Pvu9g1538 549 PANTHER PECTINESTERASE 28 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1538 Pvu-Chr9 21764864 21767620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1538 42 543 Carbohydrate Esterase AT5G09760 66.277 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1538 - - gmx:100802102 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1538 9 21764864 21767620 Pvu9g1538 9 21764864 21767620 ECH
Pvu2g2786 2 43597159 43599644 Pvu9g1538 9 21764864 21767620 PCT