Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1529 ATGACTTTGGTAGGAACAGAAAGCTCGGAGGAGGGTGCAGGCCTTCTAGAGCCTCCTGATCCCAATATTGTTGAAACTGATCCTACTAATCGCTACATTAGGTATAAAGACGTTATCGGTCAAGGAGCTTTCAAGACTGTTTACAAGGCATTTGATGAAATTAATGGACTTGAAGTTGCATGGAGCCAAATTCATATTGATGAGGTATTACAGTCACCTGGTGGCCCAGATAGGTTGTACTCAGAAGTGCATCTCTTGAAGTCACTAAAGCACGATAACATTTTGACTTTCCATAATTCTTGGATTGATGACAAGCACAGGACTATGAACTTGATTACTGAGTTATTCACCTCAGGGAACCTCAGACAGTACAGCAAGAAACACAGGAAGGTTGACATGAAGGCAGTTAAAGGATGGGCCAGGCAAATTTTAAATGGTTTAAACTATCTTCACAGTCACAACCCACCTATTATGCACAGGGACCTGAAGTGCGATAATATATTTATAAATGGTCACCGAGGAGAAGTTAAAATTGGAGATCTAGGGTTGGCAACTCTATTAAAACAAACTAATGCCAAGAGTGTAATTGGAACCCCGGAGTTCATGGCACCTGAACTGTATGATGAACATTATAATGAATTAGTCGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTTACGTCTGCATATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCTGTTGCTCTTTCCAAACTCAAAAATGCAGAAGTAAAATCATTTATTGAGAAATGTCTTGTCCCAGCGTCTCAAAGATTGTCAGCGAAAGAGCTTTTGATGGACCATTTTCTGCAAGTGAGTGGGTCAATGAAGAATCGTCGTCTACCATTACCAGATATCGTTCTTCCTAAATATGGAGCCTTTGAAAATCGTTGTCTTATGTCAGAAGGCCCTGCTAGTACGCGTATTAGATCCATTTCAATGGATCTTGGTGATGCCACTGAGCTACCACTAACCACTTTACTGTATAATTCTGTTGATTCTGTTGATGATGTTTTGCCTTTACCATGTGTTGAGATAAGAAGGTTAAAGGAAGGTGACATATTTTTTCTAAAAGGTGAACAAAATGATCAAAAGTCTGTGTCACTAGTCCTCCGCATAGCTGATCAAAGTGGGCGCGCAAGAAATATCCATTTCGTATTCTACATCAACAGTGATACTGCCATTTCAGTTTCCAGAGAAATGGTTGAGCAACTTGAACTGGCTGAACAGAATGTTAAATTCATAGCAGAGTTGATCGATCTATTACTGACCACTTTGCTTCCTGATTGGAAACCTTGTGTAGCAATTGATCATTTAGTTTCTTCTAATGGTAAATTATCTCATTCAAGTCAACAAAAAGACTTTGAGTTAACAAAACACACCCAAAGCTCAAGAGATTCTATCCAAATTGTGACTGGACCTGCTGGTCTCGCAACCTCACGTAGAACATCATCAGATAAGGAGAACAAAGATAATGTCGTTTCTGACAAGGTTTTAACTAATACAAGCATTATCATTCAAGGAGAGGCAAAGATAGACGACTCTTGTTCTGAGACGTCACAAACTTGTGCAACATCTGACTTCAATGATAAGCATTTTTCTACAGTTTCTTTCATGTCTGCTAAATCAGGATTTACAGACTTTGACTTGCACAAAGTTAATAGTCAAAGCTCACTTGCATCTGAATTCGAGGCTTCGTCTGAATTTAGGAGTTTTCCACGTGTGGAAAGCTATGGTAGGATGAAATTATTATATTGCCGTAGTGCTCCCTCCTTGTATGAACCTGAGGATGAGTTGAGAACAGAGTTAGAAATGATTGAACAACAATATCAAGAAGCAATTAAAGATTTATCAAAAAGAAGATATCAGGCCATCTCTGAGGCTAGGAGGAAGTTGTCACAAAAATTGGCAAACTTCAAATAA 1983 0.3893 MTLVGTESSEEGAGLLEPPDPNIVETDPTNRYIRYKDVIGQGAFKTVYKAFDEINGLEVAWSQIHIDEVLQSPGGPDRLYSEVHLLKSLKHDNILTFHNSWIDDKHRTMNLITELFTSGNLRQYSKKHRKVDMKAVKGWARQILNGLNYLHSHNPPIMHRDLKCDNIFINGHRGEVKIGDLGLATLLKQTNAKSVIGTPEFMAPELYDEHYNELVDIYSFGMCMLELVTSAYPYSECRNSAQIYKKVSSGIKPVALSKLKNAEVKSFIEKCLVPASQRLSAKELLMDHFLQVSGSMKNRRLPLPDIVLPKYGAFENRCLMSEGPASTRIRSISMDLGDATELPLTTLLYNSVDSVDDVLPLPCVEIRRLKEGDIFFLKGEQNDQKSVSLVLRIADQSGRARNIHFVFYINSDTAISVSREMVEQLELAEQNVKFIAELIDLLLTTLLPDWKPCVAIDHLVSSNGKLSHSSQQKDFELTKHTQSSRDSIQIVTGPAGLATSRRTSSDKENKDNVVSDKVLTNTSIIIQGEAKIDDSCSETSQTCATSDFNDKHFSTVSFMSAKSGFTDFDLHKVNSQSSLASEFEASSEFRSFPRVESYGRMKLLYCRSAPSLYEPEDELRTELEMIEQQYQEAIKDLSKRRYQAISEARRKLSQKLANFK* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1529 660 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 655 - -
Pvu9g1529 660 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1529 660 CDD STKc_WNK 31 290 - -
Pvu9g1529 660 Gene3D Transferase(Phosphotransferase) domain 1 116 296 - -
Pvu9g1529 660 SUPERFAMILY Protein kinase-like (PK-like) 34 291 IPR011009 -
Pvu9g1529 660 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1529 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Pvu9g1529 660 MobiDBLite consensus disorder prediction 1 23 - -
Pvu9g1529 660 Coils Coil 616 640 - -
Pvu9g1529 660 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Pvu9g1529 660 Pfam Protein kinase domain 36 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1529 660 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 655 - -
Pvu9g1529 660 Gene3D - 385 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1529 Pvu-Chr9 21645370 21649098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1529 133 506 MAP Kinase Kinase Kinase AT1G49160 62.400 1.15e-163 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu9g1529 Pkinase 8.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1529 K08867 - gmx:121175054 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1529 9 21645370 21649098 Pvu9g1529 9 21645370 21649098 ECH
Pvu2g2777 2 43479014 43482762 Pvu9g1529 9 21645370 21649098 PCT