Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1518 ATGAGATCCCTTCTCCAAACGAAGCAGTTGTTGGCGGTTAGGGTTCAGAGGCATCAGTTGTGGCACCACTCTCGAGACGTCAAGGTTTCGGTGTGGTGGGATTTCGAGAACTGCCAGGTGCCGGCGGGGGTTGATGCTCTGGATGTGGCGCCGGCGATCACGAAGGCTGTGAGAGCGAGTGGTATTAAGGGCCCTCTCCGAATCAACGCTTTCGGTGATGTTCTGCAGCTCTCAAAACCCAACCAGCAAGCACTTTCTCACACTGGCATTCATTTCACCCACATTCCAGGTGGAAAGAACAGTGCTGATAGATTTCTTCTCATGAATCTTATGGATTGGGTTTCTCAAAATCCTCCGCCTGCCCATCTCTTTTTGATATCTGCTGATGGAGACTTTGCTGGAATGTTACACCGGTTAAGAATTCATAATTACAATATATTACTTGCTAGCACAAGGAATGCTCCTGGTGTCCTCTGCAGTGCAGCAACTATAATATGGCAATGGTCTTCGTTAGTAAAAGGGGAACATCTTTCTGGAAAACATTTAAGCCATCCTCCTGATGGTTTGTTTGGTTCTTGGTGTGGAAATTACAAGGTGATTCCGGAAAAACCATTCTCAGATGTTAAGAAGTCTGCATCTTCAGAAAAAGTAGGCATATACAAACCTTCCTTAGATTTGCACACTGTTCCAAAAAAAGTTGTAAAACAGGTTTGCCGTATATTAAAGTCACATCGAAAAGGAATCTCAATTAGAGATCTTCGTATAGAGTTGAAGAAACGTAAAGTGAATTTTAGTAAAAAGTTTTATGGATATGGAACATTTTCTCGCTTTCTAACATCAACACTGCATGTAGAGCTTGAGCCTTTAGGCTTTGGTAATTTTCATGTATGTCTGATCCCCTCAGAATCCCCCAAACCTTTTGAGGGAAAAGTTGTGGAATCAGTAGCATCTTGTATTAAGATCGATAAGAAGGGATCTGCAGCAACTCCAAAGCTAAACGGCAAGGATAAAAACAAGGTTAGAGAAGCAAATTGGACACCCTTAACTGCATCATCTCATGAAAGGAGTATGGATGAGGATTCAAAATCATCACTTTCATTGGTTGAAAGACATGTGTCTCAGCCCCCAGATGCGTTGCAGAAATTTTCAGCGTGTAGTGGGAAGGTTGTTGATAGGACTACTGAACAACTGTCAGAGATTCAACCACAACACAAGGACAACCAACTTTCCAAAACTAAGCCAGATTCCTTAAAATTGAGTTCGAATTCTAAAACATTATCTGATTGTGACATTGTTGGTTCTGAGGATGCAAGTTATAGAATTCAGGAAAAATACACGACTTCAAGGAATCACTCTGCTGGAAATGATCAGGTTGATGAAGTTTGTCACAGCCCATATTCTACACAAGCTGATGACTCTCTGCTTGATAAAATACCTAGTGGAAGTGATAAAACTAATAGGAATGGCCCAACATTCTTTGTCAGGATCAGAGCCTGGTGGCAATTTTGGAAAGGCAATGCAGAATCTGGTGTTTCAGCTGATTGTCATAACAGGGTGGTTAGTCATTTCGAGGATTCTAACCCATCTGAACTAGTAGAGCAAACAGCTCAGGTTGTGAGTGATTTTAAAGAACCCAAGTTATCAGAGCTGGACAAGCCTGAGTTGTTTTCTAGCAGTGCCTTTTGGGATGACATAGAAACTTTTATTTTCACGCTCAAAGGATCATTAATTGTTTCCCAGTCGAAAAACAGGGAGGATATGGCGTATAAATTGCTAAAGGATGGACCCCCAGTTTTAAGATCTCTCACTGAAGAAGATATTCTTCAATTGGTGGAGTTGTTAATATCAGAGAAAAAGTGGTTGGAGGAAAACCCGTCCCAGATATTTCCTTTTAGGGTAACTAAACCAGTTCGGGGGAACTCATTGATGGGCAAATCTCAGGGTGCAAATGGTTTGAGATCTCTCTTTCTGAGCAGATCATCACAATCCAAGTTGCAAAAATCATCTGAACATGATATGGAAAAAGACGATAAGAGTATTCCTAAATCTGGAGTTTCTGCAACTGCCACTGAGACAAAATATAAGGGGAGGTCTGGAAAGGATATATTAGAAGATTGTTAG 2121 0.4144 MRSLLQTKQLLAVRVQRHQLWHHSRDVKVSVWWDFENCQVPAGVDALDVAPAITKAVRASGIKGPLRINAFGDVLQLSKPNQQALSHTGIHFTHIPGGKNSADRFLLMNLMDWVSQNPPPAHLFLISADGDFAGMLHRLRIHNYNILLASTRNAPGVLCSAATIIWQWSSLVKGEHLSGKHLSHPPDGLFGSWCGNYKVIPEKPFSDVKKSASSEKVGIYKPSLDLHTVPKKVVKQVCRILKSHRKGISIRDLRIELKKRKVNFSKKFYGYGTFSRFLTSTLHVELEPLGFGNFHVCLIPSESPKPFEGKVVESVASCIKIDKKGSAATPKLNGKDKNKVREANWTPLTASSHERSMDEDSKSSLSLVERHVSQPPDALQKFSACSGKVVDRTTEQLSEIQPQHKDNQLSKTKPDSLKLSSNSKTLSDCDIVGSEDASYRIQEKYTTSRNHSAGNDQVDEVCHSPYSTQADDSLLDKIPSGSDKTNRNGPTFFVRIRAWWQFWKGNAESGVSADCHNRVVSHFEDSNPSELVEQTAQVVSDFKEPKLSELDKPELFSSSAFWDDIETFIFTLKGSLIVSQSKNREDMAYKLLKDGPPVLRSLTEEDILQLVELLISEKKWLEENPSQIFPFRVTKPVRGNSLMGKSQGANGLRSLFLSRSSQSKLQKSSEHDMEKDDKSIPKSGVSATATETKYKGRSGKDILEDC* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1518 706 MobiDBLite consensus disorder prediction 398 424 - -
Pvu9g1518 706 Pfam NYN domain 28 162 IPR021139 GO:0004540
Pvu9g1518 706 Pfam OST-HTH Associated domain 583 632 IPR025677 -
Pvu9g1518 706 PANTHER EMB|CAB71880.1 18 706 - -
Pvu9g1518 706 MobiDBLite consensus disorder prediction 665 681 - -
Pvu9g1518 706 ProSiteProfiles OST-type HTH domain profile. 229 300 IPR025605 -
Pvu9g1518 706 CDD PIN_limkain_b1_N_like 28 150 - -
Pvu9g1518 706 MobiDBLite consensus disorder prediction 662 706 - -
Pvu9g1518 706 MobiDBLite consensus disorder prediction 327 373 - -
Pvu9g1518 706 PANTHER LIMKAIN B LKAP 18 706 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1518 Pvu-Chr9 21504669 21508342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1518 27 174 C2H2 Transcription Factor Family AT5G61190 43.624 1.36e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1518 - - vun:114196141 1173.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1518 9 21504669 21508342 Pvu9g1518 9 21504669 21508342 ECH