Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g1496 | ATGCCGTTACTGGGGGTGCAACTTACTATTCAAGATAATCATGTGGTGATGGAAAATGGCATACTAAAAGTCACCTTATCAAATCCTGGGGGAATTGTGACTGGAATACAGTATAATAACATCGACAACTTGCTTGAAGTTTTGAATGACGAATCAAACAGAGGGTATTGGGACCTTGTTTGGAGCTCACCGACAAGTACATCAACCAGTGGTACATTTGATGTCATCAAAGGAACAAAATTCCAAGTTATGGTTGAAAATGAGGACCAAGTTGAGTTATCCTTCACCAGGACGTGGGACATCTCTCTGGAGGGCAAGTTGGTTCCCTTAAATATTGACAAAAGGTTCATAATGCTTCGTGGTTGTTCGGGCTTCTACTCCTATGCAATTTATGAGCACTTGGAGGAGTGGCCTGCTTTCAATCTTGACGAAACAAGAATTGCTTTCAAGCTTAGAAAAGACAAGTTCCATTATATGGCGATGGCTGATAATAGACAAAGAAACATGCCTCTTCCAGATGACAGATTACCACCTAAGGGCAAAGCCCTTGCCTACCCAGAAGCAGTTCTACTTCTCAATCCCATCCAACCAGAACTTAAGGGAGAGGTGGATGACAAGTACCAATATTCATGCGACAACAAGGACAACAAAGTTCATGGATGGATCTGCATGGATCCTGCAGTGGGATTCTGGCTTATTACTCCCACCGATGAGTTTCGATCAGGTGGGCCCGTTAAACAAAACTTAACTTCTCATGTGGGCCCCACCACGCTTGCAATGTTTCTGAGTGCACATTATGCTGGAGAGGATTTGGTGCCTAAGTTTAATGCTGGTGAGGCATGGAAGAAAGTTTTTGGTCCTGTTTTCATTTATTTAAATTCTTCCTATGATGGAGGTGACCCCCTTAAGCTATGGGATGATGCTAAACAACAGATGTTGGTGGAAGTTCAAAGTTGGCCCTACAGTTTCCCTGAATCAGAGGACTTTGCTAAGTGGGACGAACGTGGTAATGTTAGTGGCAGGCTTTTGGTTAGAGAGAGGTTTATAAACGATGACTATATCTCAGCAAAAGGTGCTTATGTTGGCTTGGCTCCACCAGGCGATGTGGGATCATGGCAAAGAGAATGCAAGAATTATCAGTTTTGGGCTAAAGCAGACGATGATGGCTACTTCACCATCACCAATGTATGTGCAGGAGATTACAATGTTTACGCGTGGGTACCTGGTTTTATTGGTGACTATAAATATGATGTAGTTATGAACATAACAAAAGGCTGTGACATCGACCTTGGTGAGCTTGTGTATGAACCTCCTAGAGATGGTCCAACATTGTGGGAAATTGGCATTCCTGATCGAACAGCTGCTGAGTTCTATGTTCCTGACCCAAATCCCAAATATATCAACAAACTTTATGTTAATCATCCTGACAAGTTTAGGCAATATGGGTTATGGGAGAGATATGCAGAACTCTACCCTGACAAAGACCTGATCTACACAATTGGTGTTAGTGACTACACCAAAGATTGGTTCTTTGCTCAAGTTACCAGGAAGAAAGATGACAACACATTTCAAGGAACCACATGGCAGATCAAGTTTGAGCTTGATAAGGTGAACAAAAGCAGCAGCTATAAACTGCGGGTGGCTTTGGCATCTGCAACATTATCTGAATTTCAGGTTCGAGTAAATAATCCAAAGGGTCCTCGTCCTCTATTTTCAAGTGGGTTGATAGGAAGGGATAACTCGATCGCAAGGCATGGAATTCATGGACTGTATTGGCTTTACAATGTAGACATACCAGGAACTCAATTTGTTGAAGGAGATAACACAATCTTTTTGACACAGACCAGAGGCAACAGTCCATTTCAGGCAATTATGTATGATTATATTCGTTTGGAAGCTCCACCATCAACCTTCAATAACACAAACTCATAA | 1932 | 0.4224 | MPLLGVQLTIQDNHVVMENGILKVTLSNPGGIVTGIQYNNIDNLLEVLNDESNRGYWDLVWSSPTSTSTSGTFDVIKGTKFQVMVENEDQVELSFTRTWDISLEGKLVPLNIDKRFIMLRGCSGFYSYAIYEHLEEWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRLPPKGKALAYPEAVLLLNPIQPELKGEVDDKYQYSCDNKDNKVHGWICMDPAVGFWLITPTDEFRSGGPVKQNLTSHVGPTTLAMFLSAHYAGEDLVPKFNAGEAWKKVFGPVFIYLNSSYDGGDPLKLWDDAKQQMLVEVQSWPYSFPESEDFAKWDERGNVSGRLLVRERFINDDYISAKGAYVGLAPPGDVGSWQRECKNYQFWAKADDDGYFTITNVCAGDYNVYAWVPGFIGDYKYDVVMNITKGCDIDLGELVYEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLYVNHPDKFRQYGLWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKKDDNTFQGTTWQIKFELDKVNKSSSYKLRVALASATLSEFQVRVNNPKGPRPLFSSGLIGRDNSIARHGIHGLYWLYNVDIPGTQFVEGDNTIFLTQTRGNSPFQAIMYDYIRLEAPPSTFNNTNS* | 644 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g1496 | 643 | Pfam | Polysaccharide lyase family 4, domain II | 357 | 429 | IPR029413 | - | |
Pvu9g1496 | 643 | Gene3D | - | 5 | 300 | IPR014718 | GO:0030246 | |
Pvu9g1496 | 643 | SUPERFAMILY | Galactose-binding domain-like | 440 | 632 | IPR008979 | - | |
Pvu9g1496 | 643 | Gene3D | - | 333 | 425 | - | - | |
Pvu9g1496 | 643 | SUPERFAMILY | Starch-binding domain-like | 372 | 422 | IPR013784 | GO:0030246 | |
Pvu9g1496 | 643 | Pfam | Polysaccharide lyase family 4, domain III | 443 | 631 | IPR029411 | - | |
Pvu9g1496 | 643 | SUPERFAMILY | Galactose mutarotase-like | 8 | 295 | IPR011013 | GO:0003824|GO:0005975|GO:0030246 | |
Pvu9g1496 | 643 | CDD | RGL4_C | 445 | 632 | - | - | |
Pvu9g1496 | 643 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 1 | 636 | - | - | |
Pvu9g1496 | 643 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 1 | 636 | - | - | |
Pvu9g1496 | 643 | CDD | RGL4_N | 8 | 304 | - | - | |
Pvu9g1496 | 643 | CDD | RGL4_M | 334 | 433 | IPR029413 | - | |
Pvu9g1496 | 643 | Pfam | Rhamnogalacturonate lyase family | 9 | 203 | IPR010325 | - | |
Pvu9g1496 | 643 | Gene3D | - | 441 | 632 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g1496 | Pvu-Chr9 | 21229191 | 21233782 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g1496 | 1 | 634 | Polysaccharide Lyase | AT1G09890 | 70.283 | 0.0 | 949 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g1496 | K18195 | - | gmx:100814721 | 1253.04 |