Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1480 ATGGCACCCAGTTTTGACTGTGTTTCGAGCCTCCTTTGCTCAGAGGACAGCACCGTTTTCGACGACAGCCATTATGGAGGTACGATGACGGGGGTGTACGAGGACATCTGGCGTCCCCGGAGGCGCCACTTTGATGAACCGGATGAGTTGCCATTGCTGAGTGATGAGTGCTTGGCGATGATGGTGGAAAGAGAGTGCCAACTCTGGCCTGGTGTCCGTTACTTGAATAGGCTTCAGACTGGAATTTTTGACCTTGGTGCCAGAAAGGAGGCCATTGATTGGATTCACAAGGTCCGATCGCATTTAGGATTTGGTCCTCTGTGTGGATATCTATCTATAAATTACTTGGATCGATTCCTGTCTGCATATGAATTACCAAAGGGAAGAGTTTGGACAATGCAATTGTTGGCTGTGGCGTGTTTATCTCTGGCAGCCAAAATAGATGAGACAGAAGTCCCAGTGTTTCTTGATTTACAGGTGGGTGAATCGAAGTTCATATTTGAGGCTAAGACCATCCAGAGAATGGAGCTTCTAGTTCTAAGCACATTGAAGTGGAGAATGCAATCAATCACTCCTTTCACCTTCCTTGATTACTTCCTTTACAAGATCAATGGTGATCAAAGTCCATTAAAGTCTTCAGTTATGCAATCTATCCAACTAATATCAAACACTGCAAGAGGAATTGACTTCTTGGAATTCAAGCCATCAGAGATTGCAGCAGCAGTGGCCATGAATGTCATGGGGGAAGCCCAAACAGTTGACACAGGAGAAGCAATTTCTGTTCTGATTCAACACGTAGAAAAGGAGAGACTATTGAAGTGCATTAAAATGATCCAAGAGTTGTCATCCAACAACAGGGGCTCTGTCAAGGATTCAAGTGGTTCTGTCACTTGCCTACCCCAAAGCCCAATAGGTGTGTTAGATGCTTTGTGCTTCAGCCACAAAAGTGATGACACAAATGATGGTTCATGTGCTAACTCTTCACATAGTACTCCTGATGCTAAAAGGAGGAAGTTAAACAAAACCTGTGGAGCAGAGCTATTGTAG 1047 0.447 MAPSFDCVSSLLCSEDSTVFDDSHYGGTMTGVYEDIWRPRRRHFDEPDELPLLSDECLAMMVERECQLWPGVRYLNRLQTGIFDLGARKEAIDWIHKVRSHLGFGPLCGYLSINYLDRFLSAYELPKGRVWTMQLLAVACLSLAAKIDETEVPVFLDLQVGESKFIFEAKTIQRMELLVLSTLKWRMQSITPFTFLDYFLYKINGDQSPLKSSVMQSIQLISNTARGIDFLEFKPSEIAAAVAMNVMGEAQTVDTGEAISVLIQHVEKERLLKCIKMIQELSSNNRGSVKDSSGSVTCLPQSPIGVLDALCFSHKSDDTNDGSCANSSHSTPDAKRRKLNKTCGAELL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1480 348 MobiDBLite consensus disorder prediction 318 337 - -
Pvu9g1480 348 CDD CYCLIN 88 180 IPR013763 -
Pvu9g1480 348 SMART cyclin_7 93 181 IPR013763 -
Pvu9g1480 348 SMART Cyclin_C_2 190 302 IPR004367 -
Pvu9g1480 348 Pfam Cyclin, C-terminal domain 190 288 IPR004367 -
Pvu9g1480 348 Gene3D - 71 188 - -
Pvu9g1480 348 SUPERFAMILY Cyclin-like 172 281 IPR036915 -
Pvu9g1480 348 Pfam Cyclin, N-terminal domain 57 187 IPR006671 -
Pvu9g1480 348 Gene3D - 59 277 - -
Pvu9g1480 348 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 341 - -
Pvu9g1480 348 PANTHER CYCLINS 1 341 IPR039361 -
Pvu9g1480 348 SUPERFAMILY Cyclin-like 45 187 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1480 Pvu-Chr9 20939842 20942677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1480 61 325 Core Cell Cycle Gene Families AT2G22490 47.794 2.57e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1480 K18810 - gmx:547739 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1480 9 20939842 20942677 Pvu9g1480 9 20939842 20942677 ECH