Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1477 ATGTCGTTCGCTCACCACCGTCGAACCCAATCGGAGATGCATTTCCGGATCACCGACGACTTCGACCTCGAGGTCGATCTCTCTCCTCCGCATTTCCAAGATCCCACCCCGCCCAACCAATTTGGACCCAAACCCGAATCTCCGCCGCACGAGACCGCCCGCTCGGGTCACCGGAGAAGTAATTCCGCCGATACCTCTTCCTCCTCGCTGCTCGAAGGCATTGAGGCCAAGAAGGCCCTGTCCCCCGATAAGCTCGCCGAACTCTGGACCGTTGATCCCAAACGTGCCAAGAGGATTCTCGCTAACCGTCAATCCGCGGCGCGCTCTAAAGAGAGGAAAGCTTGTTACGTGTCGGAGCTTGAAAGGAAATTTCAATCCCTTCAAACGGAAGCAACCACTCTCTCTGCTCAATTAAGTCTTTTCCAGAGAGATACAACTGGTCTGAGTTCTGAAAATACGGAGTTGAAGCTTAGGTTACAAGCCATGGAACAACAAGCTAAGTTGTGTGATGCTCTAAATGAAGCACTGAAGAAAGAAGTTGATAGGCTGAGGGTTGCAACTGGAGATATGGCAATGCCTGCTGATAACTATGGCTTGGGAATGCATCAACTTACATATTCTCAAGGACCGTTCTTCTCACATCAGTCACAACATGGCCAGAGTGCAGTTCAGGCCATGCAAATGCCGCAGATGCATTCACTCTCATCTAATGTGTCTACTTCCCATGAGCCTCTGTTTGATCTAGACATTCCCTATGATATGTCCGAAATGTTGTCGAATGAATCTATCGGGCAGTTTCAGGGGCTGGACATAGGCAACGGGGTTCCTCATGTTCTGATGCCAGATTATCCCTCCAATTTCTGTTAA 867 0.4994 MSFAHHRRTQSEMHFRITDDFDLEVDLSPPHFQDPTPPNQFGPKPESPPHETARSGHRRSNSADTSSSSLLEGIEAKKALSPDKLAELWTVDPKRAKRILANRQSAARSKERKACYVSELERKFQSLQTEATTLSAQLSLFQRDTTGLSSENTELKLRLQAMEQQAKLCDALNEALKKEVDRLRVATGDMAMPADNYGLGMHQLTYSQGPFFSHQSQHGQSAVQAMQMPQMHSLSSNVSTSHEPLFDLDIPYDMSEMLSNESIGQFQGLDIGNGVPHVLMPDYPSNFC* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1477 288 CDD bZIP_plant_RF2 95 144 IPR044759 GO:0003700|GO:0006355
Pvu9g1477 288 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 51 286 - -
Pvu9g1477 288 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 2 29 - -
Pvu9g1477 288 MobiDBLite consensus disorder prediction 31 45 - -
Pvu9g1477 288 Gene3D - 93 166 - -
Pvu9g1477 288 SMART brlzneu 90 154 IPR004827 GO:0003700|GO:0006355
Pvu9g1477 288 Pfam bZIP transcription factor 94 152 IPR004827 GO:0003700|GO:0006355
Pvu9g1477 288 SUPERFAMILY Leucine zipper domain 94 148 IPR046347 GO:0003700|GO:0006355
Pvu9g1477 288 MobiDBLite consensus disorder prediction 24 69 - -
Pvu9g1477 288 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 92 155 IPR004827 GO:0003700|GO:0006355
Pvu9g1477 288 Coils Coil 159 179 - -
Pvu9g1477 288 PANTHER BZIP TRANSCRIPTION FACTOR 18 51 286 - -
Pvu9g1477 288 PANTHER BZIP TRANSCRIPTION FACTOR 18 2 29 - -
Pvu9g1477 288 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1477 Pvu-Chr9 20906360 20910335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1477 5 271 bZIP Transcription Factor Family AT2G40620 49.367 1.49e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu9g1477 bZIP_1 7.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1477 - - gmx:100807712 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1477 9 20906360 20910335 Pvu9g1477 9 20906360 20910335 ECH