Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1466 ATGACATTCAAGCGCAGGAATGGAGGCCGCAACAAGCACGGACGCGGTCACGTCAAATTCATTCGGTGCTCCAACTGCGGCAAATGCTGCCCTAAGGACAAGGCAATCAAGAGATTTCTGGTAAGGAACATTGTTGAGCAAGCTGCAGTTAGAGATGTGCAGGAGGCTTGCGTCTATGAGCAATACACTCTTCCCAAATTGTATGTGAAGATGCAGTACTGTGTTTCCTGTGCCATCCACTCCCACGTCGTTAGGGTTCGTTCCCGCACTAACAGGAGGAAGCGTGACCCTCCTCAGCGATTCATCAGGCGCAGGGATGATGCTCCAAGGCCTGGTCAGCCTGGTCAAGCACCTCGTCCTGCTGGTGCAGGAGCTCCAGTCCGAACCTGA 390 0.5359 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTNRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGAGAPVRT* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1466 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pvu9g1466 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Pvu9g1466 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pvu9g1466 129 MobiDBLite consensus disorder prediction 86 129 - -
Pvu9g1466 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pvu9g1466 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1466 Pvu-Chr9 20771323 20773249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1466 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 85.345 2.30e-70 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1466 K02976 - gmx:100781822 209.92