Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1465 ATGACATTCAAGCGTAGGAATGGAGGCCGTAACAAGCACGGACGCGGCCACGTCAAATTCATTCGGTGCTCCAACTGCGGCAAATGCTGCCCCAAGGACAAGGCAATCAAGAGATTTCTGGTAAGGAACATTGTTGAGCAAGCCGCAGTTAGAGATGTGCAGGAGGCTTGCGTCTATGAACAATACACTCTTCCCAAATTGTATGTGAAGATGCAGTACTGTGTTTCCTGTGCCATCCACTCCCACGTTGTTAGGGTTCGTTCCCGCACTAACAGGAGGAAGCGTGACCCTCCTCAGCGATTCATCAGGCGCAGGGATGATGCTCCAAGGCCTGGTCAGCCTGGTCAAGCACCTCGTCCTGCTGGTGCAGGACCTCCTGTCCGAACCTGA 390 0.5333 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTNRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGAGPPVRT* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1465 129 MobiDBLite consensus disorder prediction 85 99 - -
Pvu9g1465 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pvu9g1465 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Pvu9g1465 129 MobiDBLite consensus disorder prediction 85 129 - -
Pvu9g1465 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pvu9g1465 129 MobiDBLite consensus disorder prediction 113 129 - -
Pvu9g1465 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pvu9g1465 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1465 Pvu-Chr9 20762726 20764682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1465 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 85.345 3.99e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1465 K02976 - gmx:100781822 209.92