Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1453 ATGACTTCCCCACCCAACCTCTTCATCTCGCTTCTTCTTCTTCTTCTTCTCTTCTTCACTATCTTCTCCGCTTCTTCATCCGCCTCACTCCCGGAGCTCCGATCTCTCATGGAATTCAAGAAAGGGATAACTCAAGATCCGCACAACCTTCTAGACTCCTGGTCTCCGGCGGCGGTGGCCGAGGCCGCCGCCGCCTGTCCTACTACCTGGCAGGGCGTTGTTTGCGACGAGGAGTCCGGCAACGTCACCGGAATCGTCCTCGACCGCCTCCGCCTCGGCGGTGAGCTCAAGTTCCACACTCTCCTCGACCTCAGGATGCTCAGAAACCTCTCGCTCTCCGGCAACGACTTCACCGGAAGGTTGCCTCCCTCCCTGGGGTCGCTCTCCTCGCTGCAGCATTTGGATCTTTCGCAGAACAAGTTCTACGGCCCCATTCCCGCGCGGATCAACGACCTTTGGGGTCTCAATTACCTCAATTTGTCCAACAACCAGTTCAAGGGTGGCTTCCCCAGTGGCCTCTCCAACCTTCAGCAGCTCAGAGTTCTCGATTTGCATGCCAACGCTCTCTGGGCCGAAATTGGGGACGTCCTCTCTACCCTCCGGAATGTGGAGCGTGTCGATTTGAGTCTTAACCAGTTCTTTGGCGGACTTTCCCTCACAGTGGAGAATGTTTCTGGATTGGCCAACACAGTGCATTTTCTTAACCTCAGTCACAACAACTTGAACGGTCACTTCTTTATGAACTCCACCATTGGCCTGTTTCGCAACTTGCAAGTTTTGGACTTGAGTAATAATTCCATCACCGGGGAACTTCCTTCTTTTGGCTCGTTACCCACACTTCGCGTTCTTAGGCTTCCCCGGAACCAATTGTTTGGCTCCGTGCCCGAGGAATTGTTGCAGACTTCAGTGCCGCTGGAAGAATTGGATCTTAGCGTCAACGGGTTTACCGGCTCAATCGCTGTAATCAACTCTACAAGTTTAAATATTTTGAATCTTTCATCCAATAGTTTATCAGGATCCTTGCCAACTTCGTTGAGAAGATGTACTGTCATTGACATCAGCAGGAATATGTTATCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCCCCCTGGAGGTTATTAATCTGAGTTCAAACAAGCTGTCAGGATCCTTGCCTCCTACTTTAGGAACCTATTCAAAATTGTTTACCGTTGACTTAAGTTTAAATGAGCTCAACGGATCCATTCCACGAGGTTTAGTTACTTCATCATCAGTGACAAGACTGAATCTTTCTGGAAATCAACTTACAGGGCAACTTCTGCTTCAAGGTTCAGGAGCCAGTGAGTTACTCCTTATGCCTCCTTATCAACCAATGGAGTATCTTGATGTATCTAATAACTCCTTAGAAGGTGCCTTGCCTTCTGAGATAGATAGGATGAGTGTGCTCAAACTGCTGAATGTGGCTAGGAATGAGTTTTCTGGACCGCTGCCAAATGAGTTGAACAAACTTCTTTATTTGGAGTACCTTGATTTGTCTAACAACAAATTTTCTGGAAATATTCCTGACAAGCTTTCATCCAGCTTAACTGTATTTAACGTGTCCAATAATGATCTATCTGGTCGAGTTCCTGAAAATTTGCGGCAGTTCTCTCCTTCATCCTTTCGCCCAGGAAATGGAAAGTTAATGTTACCAAATGATTCTCCTGAGACTTCTTCTGTGCCCGATAACATTCCCGATAACCGTAGACATCATAGTTCAAAGGGTAATATCAGGATAGCCATTATTCTTGCCTCCGTGGGTGCTGCTGTTATGATTGCTTTTGTTTTATTAGCTTATCATCGAACACAACTAAAAGAATTTCATGGAAGAAGTGAGTTCACTGGGCAAAATACCAGAAGAGATGTCAAGTTAGGAGGACTTTCTAGGTCTTCCCTCTTTAAGTTCAATACAAATGTTCAACCCCCAACAACTTCATTGAGCTTTTCAAATGACCACCTTCTGACTTCCAATTCGAGGTCACTCTCTGGTGGACAGTCAGAGTTTGTCACTGAAATTTCTGAGCATGGCTTGCCTCAGGGAATGGTGGCTACCAGTTCAGCATCTGTGAATCTTAATTTGATGGATAACCCTCCCACTTCATCTGGAAGGAAGTCTTCTCCTGGTTCTCCATTGTCGTCCTCACCCCGTTTCATAGAGACCTGTGAAAAGCCAGTGATGTTGGATGTTTACTCACCAGATCGGTTGGCTGGGGAATTGTTTTTCCTGGATTCTTCCCTAGCATTCACTGCAGAGGAATTATCTCGAGCCCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATATAAAGCAACTTTGGACAGTGGTCATATGTTGACTGTAAAGTGGTTACGGGTGGGATTGGTGAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCATTACTAGCATACTATTGGGGGCCTAGGGAACAAGAAAGGCTTCTTTTAGCTGACTATATACACGGGGACAACTTGGCCCTTCATCTCTATGAGAGCACACCCCGGAGGTACTCCCCATTATCATTCACCCAGAGAATAAGAGTTGCTGTTGATGTTGCACGATGTCTTCTATACCTTCATGACCGAGGACTTCCCCATGGAAATCTGAAGCCCACAAATATAGTGTTAGCAGGCCCTGATTTCAATGCTCGTCTTACTGACTATGGTCTGCACCGGCTGATGACACCGGCTGGAATTGCAGAGCAGATACTCAATCTTGGAGCACTTGGATACCGTGCCCCCGAACTTGTTACTGCATCCAAACCGGTTCCATCCTTCAAGGCAGATGTGTATGCTCTTGGTGTGATCCTAATGGAATTGTTGACAAGAAAAAGTGCAGGTGACATAATATCAGGGCAGTCAGGTGCTGTTGATCTTACAGATTGGGTTAGGCTGTGTGAGCGAGAAGGAAGGGTAATGGACTGTATTGACAGAGACATTGCAGGTGGGGAAGAATCCTCCAAAGAGATGGATGAACTGCTTGCAATATCTCTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTGTGTTCAATATCCGTTTGA 3132 0.4633 MTSPPNLFISLLLLLLLFFTIFSASSSASLPELRSLMEFKKGITQDPHNLLDSWSPAAVAEAAAACPTTWQGVVCDEESGNVTGIVLDRLRLGGELKFHTLLDLRMLRNLSLSGNDFTGRLPPSLGSLSSLQHLDLSQNKFYGPIPARINDLWGLNYLNLSNNQFKGGFPSGLSNLQQLRVLDLHANALWAEIGDVLSTLRNVERVDLSLNQFFGGLSLTVENVSGLANTVHFLNLSHNNLNGHFFMNSTIGLFRNLQVLDLSNNSITGELPSFGSLPTLRVLRLPRNQLFGSVPEELLQTSVPLEELDLSVNGFTGSIAVINSTSLNILNLSSNSLSGSLPTSLRRCTVIDISRNMLSGDISVIQNWEAPLEVINLSSNKLSGSLPPTLGTYSKLFTVDLSLNELNGSIPRGLVTSSSVTRLNLSGNQLTGQLLLQGSGASELLLMPPYQPMEYLDVSNNSLEGALPSEIDRMSVLKLLNVARNEFSGPLPNELNKLLYLEYLDLSNNKFSGNIPDKLSSSLTVFNVSNNDLSGRVPENLRQFSPSSFRPGNGKLMLPNDSPETSSVPDNIPDNRRHHSSKGNIRIAIILASVGAAVMIAFVLLAYHRTQLKEFHGRSEFTGQNTRRDVKLGGLSRSSLFKFNTNVQPPTTSLSFSNDHLLTSNSRSLSGGQSEFVTEISEHGLPQGMVATSSASVNLNLMDNPPTSSGRKSSPGSPLSSSPRFIETCEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPREQERLLLADYIHGDNLALHLYESTPRRYSPLSFTQRIRVAVDVARCLLYLHDRGLPHGNLKPTNIVLAGPDFNARLTDYGLHRLMTPAGIAEQILNLGALGYRAPELVTASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1453 1043 SMART LRR_typ_2 104 127 IPR003591 -
Pvu9g1453 1043 SMART LRR_typ_2 277 301 IPR003591 -
Pvu9g1453 1043 SMART LRR_typ_2 128 152 IPR003591 -
Pvu9g1453 1043 SMART LRR_typ_2 254 276 IPR003591 -
Pvu9g1453 1043 SMART LRR_typ_2 176 200 IPR003591 -
Pvu9g1453 1043 SMART LRR_typ_2 498 522 IPR003591 -
Pvu9g1453 1043 MobiDBLite consensus disorder prediction 699 724 - -
Pvu9g1453 1043 Pfam Leucine Rich Repeat 256 273 IPR001611 GO:0005515
Pvu9g1453 1043 Gene3D Ribonuclease Inhibitor 193 301 IPR032675 -
Pvu9g1453 1043 Gene3D Phosphorylase Kinase; domain 1 744 840 - -
Pvu9g1453 1043 Gene3D Ribonuclease Inhibitor 302 566 IPR032675 -
Pvu9g1453 1043 Pfam Leucine rich repeat N-terminal domain 32 76 IPR013210 -
Pvu9g1453 1043 PANTHER OS07G0626500 PROTEIN 10 1040 - -
Pvu9g1453 1043 SUPERFAMILY RNI-like 323 543 - -
Pvu9g1453 1043 MobiDBLite consensus disorder prediction 537 579 - -
Pvu9g1453 1043 PANTHER OS07G0626500 PROTEIN 10 1040 - -
Pvu9g1453 1043 Gene3D Transferase(Phosphotransferase) domain 1 842 1043 - -
Pvu9g1453 1043 ProSiteProfiles Protein kinase domain profile. 763 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1453 1043 ProSiteProfiles Leucine-rich repeat profile. 256 278 IPR001611 GO:0005515
Pvu9g1453 1043 Gene3D Ribonuclease Inhibitor 32 192 IPR032675 -
Pvu9g1453 1043 Pfam Protein kinase domain 767 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1453 1043 SUPERFAMILY L domain-like 67 362 - -
Pvu9g1453 1043 SUPERFAMILY Protein kinase-like (PK-like) 766 1038 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1453 Pvu-Chr9 20620789 20626169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1453 11 620 Receptor kinase-like Gene Family AT5G62230 33.010 4.31e-61 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu9g1453 Pkinase 9.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1453 - - gmx:100802768 1773.06