Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1439 ATGGAATTGGCCGCGAAGCTTCATCACTTAGACCTCACCGGCGCGGTCATTTTAGATACACGAAAGCCCTCCGTGCTACGCCACCTTCCGCCACGCGTCACCACCAGAGCGAACACCAACAACACTAACATCAGCACCAATCTAATTTACACCAGCCGCTTCTCGGGCCCATTGCGGCCCAGTTCCGCTTCCTCTTCGGGCGTAACAACTGTAACCGTCGACGACGACATCGAGTCTCTCTTCTCCGAAACCGTCTCGGAAGAGCCGCGGCGCGGGAGGAAGCAGCAGAGTGGAGGCGCGTCGGGCGTGTCGTCGGGGGTGAAGCTGGAAAACGTGGGGAAGGCGTACAAGGGCGTGACAGTGTTGAAGGACGTGAGTTGGGAGGTGAAGAAGGGGGAGAAGGTGGGTTTGGTTGGCGTGAACGGCGCGGGGAAGACGACGCAGATGAGGATTATCGCTGGATTGGAGGAGCCGGATTACGGGAACGTGATAAAGGCGAAGTCGAACATGAAAATCGCGTTTCTGAATCAGGAGTTCGAGGTCTCGCTGAGCAGGACGGTGAGGGAGGAGTTCATGAGCGCGTTCAAGGAGGAAATGGAGGTGGCGGGGAAGTTGGAGAGGGTGCAGAAGGCGCTCGAGGGTTCTGTCAACGATTTGGAGTTGATGGGAAGGCTTTTGGATGAGTTTGATTTGCTTCAGCGGAGGGCTCAGTCTGTGGACCTCGATGAGGTTGATGCGAAAATAAATAAGTTGGTGCCTGAACTTGGCTTTGCTCCTGAGGATTCTGATAGGTTGGTTGCGTCTTTCAGTGGAGGCTGGCAGATGAGAATGTGTCTTGGAAAGATTCTACTCCAGGATCCTGATTTGTTGCTGTTAGATGAGCCTACAAATCACCTTGATCTTGACACCATTGAGTGGCTTGAGGAGTATCTTAACCAGCAGGATGTGCCGATGGTTATCATTTCCCATGACCGAGCTTTCCTTGATCAACTGTGTACAAAAATTGTGGAAACTGACATGGGTGTCTCCAGGACGTTTGAGGGAAATTATTCGCAGTACATAATTTCAAAAGCAGCATGGATTGAGGCACAGTATGCTGCTTGGGAGAAGCAGCAGAAAGAAATTGAGCACACAAGAGACTTGATCAGTAGATTAAGTGCTGGAGCAAATTCTGGCCGTGCTTCGTCTGCTGGAAAGAAGCTGGAGAGACTCCAGGAAGAGGAACTGGTGGAGAAGCCATTTGAACGCAAACAGATGAAAATCAGGTTCCCTGAGCGTGGACAGAGTGGAAGATCTGTTGTAACAATTAAGAACTTGGAATTTGGCTTTGAGGATAAGCCACTTTTCAAAAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTTCTTTACTGAAATTGATTATGGGTTTGGAAAAGCCAACTGGGGGTGAAGTTTTGCTTGGGGAGCATAATGTGTTACCTAACTATTTTGAGCAGAATCAGGCCGAGGCACTTGATCTAGACAAGACAGTGCTTGAGACAGTAGAGGAAGCAGCAGAGGACTGGAGGATAGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGACCGAAAAGTTTCACTATTAAGTGGTGGTGAGAAGGCACGGCTGGCTTTTTGCAAGTTCATGGTAAAACCATCCACTCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAGTGAATACGAGGGCACTGTTATCACAGTATCTCATGACAGATACTTCATAAAGCAAATAGTTAACAGGGTCATAGAAATTAAAGATGGCACTATACAGGATTATGCAGGTGATTACAATTATTATTTAGAGAAGAATCTTGATGCTAGGGAAAGAGAACTTGAACGCGAGGCAGAACTTGATAGCAAAGCTCCTAAAGTGAAAGCCAAATCCAAGATGTCCAAGGCTGAGAAAGAAGCACGGAAGAAGCAAAAGGTGCAAGCCTTTCAGGCAGCAAAACAGAAGTCTAAAGGTGTGAAAAATGCGAAGAGATGGAATTGA 2106 0.4744 MELAAKLHHLDLTGAVILDTRKPSVLRHLPPRVTTRANTNNTNISTNLIYTSRFSGPLRPSSASSSGVTTVTVDDDIESLFSETVSEEPRRGRKQQSGGASGVSSGVKLENVGKAYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDYGNVIKAKSNMKIAFLNQEFEVSLSRTVREEFMSAFKEEMEVAGKLERVQKALEGSVNDLELMGRLLDEFDLLQRRAQSVDLDEVDAKINKLVPELGFAPEDSDRLVASFSGGWQMRMCLGKILLQDPDLLLLDEPTNHLDLDTIEWLEEYLNQQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYIISKAAWIEAQYAAWEKQQKEIEHTRDLISRLSAGANSGRASSAGKKLERLQEEELVEKPFERKQMKIRFPERGQSGRSVVTIKNLEFGFEDKPLFKKANLTIERGEKIAIIGPNGCGKSSLLKLIMGLEKPTGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVITVSHDRYFIKQIVNRVIEIKDGTIQDYAGDYNYYLEKNLDARERELEREAELDSKAPKVKAKSKMSKAEKEARKKQKVQAFQAAKQKSKGVKNAKRWN* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1439 701 Gene3D - 397 662 IPR027417 -
Pvu9g1439 701 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524
Pvu9g1439 701 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 54 691 - -
Pvu9g1439 701 Pfam ABC transporter 336 423 IPR032781 -
Pvu9g1439 701 SMART AAA_5 458 626 IPR003593 -
Pvu9g1439 701 SMART AAA_5 131 346 IPR003593 -
Pvu9g1439 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 434 649 IPR003439 GO:0005524
Pvu9g1439 701 Coils Coil 661 681 - -
Pvu9g1439 701 CDD ABCF_EF-3 108 337 - -
Pvu9g1439 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 353 IPR027417 -
Pvu9g1439 701 MobiDBLite consensus disorder prediction 651 681 - -
Pvu9g1439 701 PANTHER ABC TRANSPORTER F FAMILY MEMBER 5 54 691 - -
Pvu9g1439 701 MobiDBLite consensus disorder prediction 82 105 - -
Pvu9g1439 701 MobiDBLite consensus disorder prediction 651 701 - -
Pvu9g1439 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 639 IPR027417 -
Pvu9g1439 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 107 365 IPR003439 GO:0005524
Pvu9g1439 701 ProSitePatterns ABC transporters family signature. 269 283 IPR017871 GO:0005524
Pvu9g1439 701 CDD ABCF_EF-3 434 626 - -
Pvu9g1439 701 Pfam ABC transporter 122 297 IPR003439 GO:0005524
Pvu9g1439 701 Pfam ABC transporter 450 581 IPR003439 GO:0005524
Pvu9g1439 701 Gene3D - 104 390 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1439 Pvu-Chr9 20470796 20476350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1439 431 651 Calmodulin-binding Proteins AT2G36910 26.316 2.94e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1439 - - gmx:100796907 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1439 9 20470796 20476350 Pvu9g1439 9 20470796 20476350 ECH