Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g1434 | ATGATGTCAACAACGTCTCAAACCAGTCTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCTACGCAGATGGGGTTCAATATTCCTTTCCCATCAAACCAGGCCTTCCCTCCTTTGGGTTGCCATCAATCTTTGAAATCCATCAGTGCAGTAGTTCCTTCACTTTCATCTGAACCTGCTTCTTCTGCACCCAATTTTGCTGAAACCCTATTTTCAACCGCTGTTCAGAGACCACGAGAAGATCTCACTTCAAGTTTGGTAGGAGGAGGAGGACAACTCCTTTCCTTGAACAGATCGAGAGTGAATCCATGGGCATGGGAAGAAGTGAGCGATTGCTTGATGAGCAAAAGAATGGGAGATGATAATCGTCATCTAGGGGTTTCCGCCATGAAGATGAAGAAAATGAAGGGAAGAAGAAAGGTGCGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGAAGTGGATGTGTTGGATGATGGCTACAAGTGGAGAAAGTACGGACAGAAAGTGGTAAAGAATACTCAGCACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTGAAGAAACGCGTGGAGCGGTTGGCGGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGTGCACTCGCCATCAAATGAACTTGAAGACTCACATTCTCCTTCTGAACTTAGTAGCTTCTTCTGGTAG | 708 | 0.459 | MMSTTSQTSLNHSLFEEQDQIPTQMGFNIPFPSNQAFPPLGCHQSLKSISAVVPSLSSEPASSAPNFAETLFSTAVQRPREDLTSSLVGGGGQLLSLNRSRVNPWAWEEVSDCLMSKRMGDDNRHLGVSAMKMKKMKGRRKVREPRFCFKTMSEVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSHSPSELSSFFW* | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g1434 | 235 | SUPERFAMILY | WRKY DNA-binding domain | 150 | 217 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu9g1434 | 235 | PANTHER | WRKY TRANSCRIPTION FACTOR 13-RELATED | 60 | 226 | - | - | |
Pvu9g1434 | 235 | Gene3D | WRKY domain | 145 | 211 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu9g1434 | 235 | ProSiteProfiles | WRKY domain profile. | 153 | 218 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu9g1434 | 235 | SMART | WRKY_cls | 158 | 217 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu9g1434 | 235 | Pfam | WRKY DNA -binding domain | 159 | 215 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu9g1434 | 235 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 60 | 226 | IPR044810 | GO:0003700 | |
Pvu9g1434 | 235 | MobiDBLite | consensus disorder prediction | 215 | 235 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g1434 | Pvu-Chr9 | 20401295 | 20404607 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu9g1434 | 128 | 235 | WRKY Transcription Factor Family | AT4G39410 | 81.416 | 8.11e-64 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pvu9g1434 | WRKY | 1e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g1434 | - | - | gmx:100127389 | 384.03 |