Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1433 CTTCTTGATGCCACCAATGGCTTTCACAATGACAGTCTCATCGGCTCTGGCGGATTTGGTGATGTGTACAAGGCTCAGTTGAAGGACGGAAGTGTTGTTGCTATCAAGAAGCTGATTCATGTCAGCGGACAAGGGGACAGAGAATTCACTGCTGAAATGGAGACCATTGGAAAAATCAAGCACAGGAACCTTGTTCCCTTGCTGGGATACTGCAAGGTTGGGGAGGAGAGACTCTTGGTTTATGAGTATATGAAATACGGCAGCTTAGAGGATGTTCTGCATGATCAGAAGAAAGCGGGGATAAAGCTGAACTGGTCGATTAGGAGGAAAATTGCCATTGGAGCTGCTAGAGGATTGGCTTTTCTTCACCACAATTGTATCCCTCACATCATTCATAGAGATATGAAGTCAAGCAATGTGTTGCTTGATGAAAACCTAGAAGCGAGGGTGTCTGATTTTGGAATGGCTAGGCTTATGAGTGCTATGGATACACATTTGAGTGTGAGCACACTGGCGGGCACCCCAGGGTATGTTCCTCCTGAGTACTACCAGAGCTTCAGATGCTCCACTAAAGGTGATGTCTACAGTTACGGTGTGGTTTTGCTGGAGCTGCTGACTGGAAAAAGGCCTACCGACTCAGCTGATTTTGGTGACAATAATCTTGTTGGATGGGTTAAACAACATGCCAAGCTGAAAATAAGTGATATTTTTGATCAGGAGCTCATGAAGGAAGACCCCAATCTGGAGATGGAACTTTTGCAGCACCTGAAGATTGCGTGTTCCTGTTTGGATGATCGGCCATGGAGGCGTCCCACCATGATTCAAGTAATGGCAATGTTCAAGCAGATTCAGGTGGGATCTGGGATTGATTCTCAGTCAACCATAGCCACCGAAGAGGAAGGTTTCAATGCCGTTGAAATGGTGGAGATGAGCATTAAAGAAGCTCCAGAATTGAGCAAGCACTAG 966 0.4607 LLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKAGIKLNWSIRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDIFDQELMKEDPNLEMELLQHLKIACSCLDDRPWRRPTMIQVMAMFKQIQVGSGIDSQSTIATEEEGFNAVEMVEMSIKEAPELSKH* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1433 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pvu9g1433 321 PIRSF ILK 4 293 - -
Pvu9g1433 321 Pfam Protein kinase domain 8 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1433 321 SMART serkin_6 8 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1433 321 Gene3D Transferase(Phosphotransferase) domain 1 84 285 - -
Pvu9g1433 321 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 301 - -
Pvu9g1433 321 CDD STKc_IRAK 14 283 - -
Pvu9g1433 321 ProSiteProfiles Protein kinase domain profile. 8 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g1433 321 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Pvu9g1433 321 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pvu9g1433 321 SUPERFAMILY Protein kinase-like (PK-like) 3 286 IPR011009 -
Pvu9g1433 321 PANTHER SYSTEMIN RECEPTOR SR160-LIKE 1 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1433 Pvu-Chr9 20369888 20370855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1433 1 317 Receptor kinase-like Gene Family AT4G39400 89.308 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pvu9g1433 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1433 K13415 - pvu:PHAVU_009G1385000 647.506