Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1421 ATGGACAACATGGGAGACCCAAAAAGCATCATGAAAGAGCTACTACAAGGTTTGGAGTTGGCAAGGCAGCTCCAAGTGTATCTCCACACGCCTTCTTCGTCCCAAGAAACCCGTGACCTCATCCAGAAGATCATATCCACCTTTGAAAAGGCACTTGAAATGGTAAATTGGAAAGGGCCAGTGCCTAAGGGTGAGTCATCGCAGCTGCCCATAACAGCTGCAATCCGAATGTCAGACTCACCTATCAGCAGTAGTCCCCAAAGTGAAGACTCCGAGAGAGATTTGAAGGACCAAGACCACAATGCTTTCAGAAAAAGAAACACTTTACCGAGATGGACAAAAAGGATTCGGGTTACACCAGGTATGGGGGTGGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGTCAGAAAGACATTCTTGGAGCCATGTACCCCAGGGGCTATTACAGATGTACCCACAGAACTGTTCAAGGTTGCATGGCAACAAAGCAAGTGCAAAGATCTGATGAAGACTCTACAATTTTTGAAATCAATTACCGAGGAAAGCACACATGCACGGTGGCCCACAACATGGGTTCTTCTTCAATAATTCCACTGGAAAACCAAGAACCAAGTCTGAACAACACAAATCAGCAGCAGAATATCTTGCAAAGCCTTGAGCAGCAACCAAATGATTTACTTTTGAATCTCCGAGAAGGGTTGAGAGTCCAAACAGAGAACCTAGATTCCACAGACCAATCATTTGCTCCATTCCTTTTCCCATTATCAACAAACATTAAAAATGAAGGTCAAGTTTTCCCTCCCCATTTGCTTGAAAATTTCAGTTCTCCTTATATGTCACCTGCTACATCCGGAATAAGCCACTATTCGGTGTCTCCAAGTAGGGTGAACAGTGTTGTAGGGAACCCAAATTTGGCAACTTTTGAGTCTCATATCAATGACATGATCCCAGCTGCTACTTCAGCTCCAAACTCAGCAGCAGTTGCTTTAGAGTTTCCTTTCAACCAGTTTGAATTTGACGGTCAGAACTTCAGATTCGATAACCCATGA 1059 0.44 MDNMGDPKSIMKELLQGLELARQLQVYLHTPSSSQETRDLIQKIISTFEKALEMVNWKGPVPKGESSQLPITAAIRMSDSPISSSPQSEDSERDLKDQDHNAFRKRNTLPRWTKRIRVTPGMGVEGPLDDGYSWRKYGQKDILGAMYPRGYYRCTHRTVQGCMATKQVQRSDEDSTIFEINYRGKHTCTVAHNMGSSSIIPLENQEPSLNNTNQQQNILQSLEQQPNDLLLNLREGLRVQTENLDSTDQSFAPFLFPLSTNIKNEGQVFPPHLLENFSSPYMSPATSGISHYSVSPSRVNSVVGNPNLATFESHINDMIPAATSAPNSAAVALEFPFNQFEFDGQNFRFDNP* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1421 352 ProSiteProfiles WRKY domain profile. 123 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g1421 352 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 351 IPR044810 GO:0003700
Pvu9g1421 352 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 1 351 - -
Pvu9g1421 352 MobiDBLite consensus disorder prediction 89 106 - -
Pvu9g1421 352 Gene3D WRKY domain 121 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g1421 352 SUPERFAMILY WRKY DNA-binding domain 127 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g1421 352 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g1421 352 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g1421 352 MobiDBLite consensus disorder prediction 79 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1421 Pvu-Chr9 20185631 20187441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1421 8 268 WRKY Transcription Factor Family AT4G23810 36.897 2.01e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu9g1421 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1421 - - gmx:100776906 538.11