Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1386 ATGGTGCCTCCGGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTTCACCATCTCTTTTAAGATCAAATTCTGGAATGCTAGGAGCTCAAGGGGGTCCCATGCCGCAGACATCCTTCCCTTCACTTGTGTCTCCTCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATGTAACTTCCATACTGAATCAATCTTTCCCAAATGGAGCTCAGAATCCTGGGCTATCTGGTCCAGGAAGTAGCCAACGGGGAGCAATTGATACTGGAGCTGAAACAGATCCACTCTCCACTGTTGGCAATGGAATGAGCTTCAATAATTCTTCTTCCACGTTTGTACAGTCAAATATAGTAAATGCTGCTTCCTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACCCTTCTAGTAACCAGATGTTGCCTGATCAACAACATCAACAACATTCCCAACAGCTTGAACCTCAAAATTTCCAACACAGTCAGCAGTCAATGCAACAGTTCTCTGGCCCTCTAAATACGCAGCAGCTGCCTCCACAGCAGCATTTTCAATCAATTCGAGGAGGAATAGGTGGTATGGGACCAGTAAAGCTAGAGCCCCAGGTAAGCAACGATCAACTTGGACAGCAGCAGCAGCCATTGCAGTCATTAAGGAACCTTTCTTCAGTTAAATTGGAGCCACAACAAATGCAGACAATGAGAACACTGGGACCTGTTAAAATGGAGCCTCAGCATTCTGATCAACCATTATTTTTGCAGCAGCAACAGCAGCAACAACAACAACAACAGCAACAGCAATTCCTCCACATGTCTAGTCAATCATCTCAGGCTACTGTTGCCCAGATCAATCTTTTGCGCCAGCACAGGCTTTTACAGTTACAACAACAACATCAGCAGCAACAACTCTTGAAGGCAATGCCTCAACAACGGTCCCAGCTACCGCAGCAATTTCAACAGCAGAGCATGCTAATGAGAACTGTGAAACCAGCATATGAACCCGGAATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAATATTGAGTTCTGGAGAAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCTATGTATGGAAGTGGAAGACAAACAACTGGAGTTTCCCTTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAGCCTGGACGTGGTTTTGAAGCAACTGTTGAGGTTCTTCCCCGGCTTTTCAAGATAAAGTATGAAAGTGGTACTTTGGAAGAACTACTTTATGTTGACATGCCTCGTGAATATCATAATACCTCTGGTCAGATAGTTCTAGATTACGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGAGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGTTCTTGGGAATTTTGTGCTCGGCGCCATGAGGAGCTCATACCGAGGAGATTGTTAATACCACAGGTTAGCCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCTTTTACTCAAAATGCAACACCAAATATATCTGTTCCAGAATTACAAAATAATTGCAATATGTTTGTTGCATCGGCCCGTCAGTTGGCTAAAGCCTTAGAAGTACCATTGGTTAATGATTTAGGATACACAAAGAGATATGTGCGCTGCCTACAGATATCAGAAGTTGTAAATAGTATGAAAGACTTGATAGATTACAGCAGGGAAACTCGGACTGGACCTATGGATAGCTTGGCAAAGTTCCCTCGGAGGACAAATGGTTCATCTGGACCTCGTGGTCAAGCACAACAGCATGAAGAACAATTACAGCAGCAGCAACAGCAACAAATGGTGGCCCATAACTCAAATGGTGATCAAAACTCGGTACAAGCTGCTGCCATGCAAATTGCTTCTAGCAATGGTATGGTCAGTGTAAATAACAATGTCAACTCGGCATCCACATCAACCACCACAAGTACTATTGTTGGACTTCTCCACCAGAATTCAATGAATTCTAGACAGCAAAATTCAATGAACAATGCAAGTAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGTTCTTCCAATACGGTGCCACAGGCCCAGCCAAATTCATCCCCTTTTCAATCACCGACGCCCTCTTCTAACAACCCCCCACAAACATCTCACCCTACTTTAACATCTGCCAATCACATGAGCGCAACTAACCCAGCAGCTAATATTTCCATGCAACAGCAGCAGCCATCTATATCAGGTGATCCTGACCCTAGTGATACTCAAAGCTCAGTCCAGAAAATCATACATGAAATGATGATGTCCTCTCAGATTAACGGTGCAGGTGGAATGATTGGTGTTGGTTCTCTTGGAAATGATGTGAAAACTGTAAATGGTATTCTGCCAGTGAGTGCCAATACAGGGCTCAATGGTGGCAATGGCTTGATGGGTAACGGGTCAATGAACAGTAATTCAGGCGTTGGGGTTGGTAATTATGGCACAATGGGTCTTGGTCAATCCTCTATGCCTAATGGAATGAGAGCTGCTGTGGTGAATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTCTTGCTCGAGATCAAGCTATGAATCATCAACAAGATTTGTCAAACCAACTACTTAGCGGGCTAGGGGCAGTAAATGGTTTTAGTAATCTTCAATTTGATTGGAAACCTTCTCCTTGA 2742 0.4391 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPQTSFPSLVSPRTQFNNMNILGNMSNVTSILNQSFPNGAQNPGLSGPGSSQRGAIDTGAETDPLSTVGNGMSFNNSSSTFVQSNIVNAASSGQGQGQQFSNPSSNQMLPDQQHQQHSQQLEPQNFQHSQQSMQQFSGPLNTQQLPPQQHFQSIRGGIGGMGPVKLEPQVSNDQLGQQQQPLQSLRNLSSVKLEPQQMQTMRTLGPVKMEPQHSDQPLFLQQQQQQQQQQQQQQFLHMSSQSSQATVAQINLLRQHRLLQLQQQHQQQQLLKAMPQQRSQLPQQFQQQSMLMRTVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVSLQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNTSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNISVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMDSLAKFPRRTNGSSGPRGQAQQHEEQLQQQQQQQMVAHNSNGDQNSVQAAAMQIASSNGMVSVNNNVNSASTSTTTSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSNTVPQAQPNSSPFQSPTPSSNNPPQTSHPTLTSANHMSATNPAANISMQQQQPSISGDPDPSDTQSSVQKIIHEMMMSSQINGAGGMIGVGSLGNDVKTVNGILPVSANTGLNGGNGLMGNGSMNSNSGVGVGNYGTMGLGQSSMPNGMRAAVVNNSIMNGRGGMASLARDQAMNHQQDLSNQLLSGLGAVNGFSNLQFDWKPSP* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1386 913 Pfam LIM-domain binding protein 341 595 IPR029005 -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 732 775 - -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 12 46 - -
Pvu9g1386 913 PANTHER LIM DOMAIN-BINDING PROTEIN 1 912 IPR029005 -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 682 724 - -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 588 638 - -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 1 46 - -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 67 106 - -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 125 212 - -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 682 775 - -
Pvu9g1386 913 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 912 - -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 125 185 - -
Pvu9g1386 913 MobiDBLite consensus disorder prediction 599 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1386 Pvu-Chr9 19713596 19722986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1386 1 909 C2H2 Transcription Factor Family AT1G43850 60.296 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1386 - - gmx:100799771 1423.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1386 9 19713596 19722986 Pvu9g1386 9 19713596 19722986 ECH