Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1384 ATGTCATTAGTTAGGTCTGTTGATCTAGCTCCTACATCGTATAAAAATGCCAAGCTCTTCTCACTAAAGGGAACTGATGTTAGACCAGGTTTGTCCTCCCAAATTTTTGGTCCTGATAAGCATAGGAGCATGGACATGGCAGATTCTTACTCCAGCGAGAGTTATGAGAAGTATTTCCATGACTGTCAAACAGAAGAACTGATAGAACCATCTAATTCCAGCATCTCTGGAAGCTCAATTCCCCCTGATGTAGCCTCTTCTTACCAGCTTACAGCCAGTTCAGAAGCTTCTGTGGTTGCCAATAACCCATTTGATTGTTCTTTCATGTCTACAATGCATCATGATGGTTATCAGTCCAACTTTGGATCAGATTTGATGGATAATGGAAGCCTCGATTCCCGTAAAACTGACGGTCTAATGAGTTTAAAACTACAAGCATTGGAGAGGGCATTGCTTGATGATAGTGAGGCTGAGGAGGAGGAGCTGGAAGAGGAAGACATATTTGAGGCTGTTCAAAGCATGGAAATTGATCCAGACCTTGCTGAGTGGGCTGATTCCATGCAGAATGTAGTCCTCCATGACTCACCAAAGGAGTACTCTTCTTCAGATTCCAGCATCAGCAGCATCAGCAGCACCAAAGAAATATCACTAACTTCTCAGACCCCCAAGCAGCTGCTTTATGAATGTGCTATTGCACTTTCAGAAGGAAACGAAGTGGAAGGATCATCCATGATAAACAATCTCAGGCAGATGGTCTCAATTCAAGGAGAGCCTTCTCAAAGAATTGCAGCCTATATGGTTGAGGGACTTGCAGCTCGCCTAGCCGAATCCGGCAAAAGTATTTACAAAGCTCTGAGATGCAAGGAACCTCCTTCTTCAGACCGTCTAGCAGCTATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGATTTATTGCTGCTAACAATGCAATTACAGAAGCAGTGAAAGATGACATGAACATTCATATCATAGACTTTGACATCAATCAAGGAAGCCAGTACATTAATCTAATCCAAACACTTGCTTCAAGGTCAAGTAAGCCACCCCATGTTAGATTGACTGGTGTTGATGATCCTGAGTCCGTGCAGCGATCTATTGGAGGCCTAAAGAACATAGGACAACGACTAGAAAAACTAGCAGAGGCACTTGGTTTACCATTTGAGTTCCGAGCAGTGGCATCAAGGACTTCCATTGTCACCCCATCAATGCTCAACTGTAGTCCTGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCATATGCCTGATGAGAGTGTTTCTACAGTAAACGAACGGGACCAACTTCTTCGGTTGGTGAAGAGCTTGAACCCAAAGCTTGTGACAGTTGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTGCCTAGATTTGTTGAATCCTACAATTACTACTCTGCTGTGTTTGAGTCACTTGATGTTACTCTTCCTAGAGAAAGCCAGGATAGGATGAATGTTGAAAGGCAATGCTTGGCCAGGGACATTGTCAATGTTGTTGCATGTGAGGGCGAGGATAGGATAGAACGGTATGAAGTGGCAGGAAAATGGAGAGCAAGGATGACAATGGCTGGCTTCACTTCATCTCCAATGAGCACAAATGTGACTGATGAAATCCGAAAACTCATTAAGGTGATGTATTGTGACAGGTACAAGATAAAGGAGGAAATGGGTGCACTTCACTTTGGGTGGGAAGACAAAAACTTGATCGTTGCATCGGCATGGAAGTTACCAAGATAA 1791 0.4372 MSLVRSVDLAPTSYKNAKLFSLKGTDVRPGLSSQIFGPDKHRSMDMADSYSSESYEKYFHDCQTEELIEPSNSSISGSSIPPDVASSYQLTASSEASVVANNPFDCSFMSTMHHDGYQSNFGSDLMDNGSLDSRKTDGLMSLKLQALERALLDDSEAEEEELEEEDIFEAVQSMEIDPDLAEWADSMQNVVLHDSPKEYSSSDSSISSISSTKEISLTSQTPKQLLYECAIALSEGNEVEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANNAITEAVKDDMNIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVQRSIGGLKNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCSPGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVESYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVTDEIRKLIKVMYCDRYKIKEEMGALHFGWEDKNLIVASAWKLPR* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1384 596 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 594 IPR005202 -
Pvu9g1384 596 Coils Coil 145 165 - -
Pvu9g1384 596 Pfam GRAS domain family 223 593 IPR005202 -
Pvu9g1384 596 ProSiteProfiles GRAS family profile. 213 593 IPR005202 -
Pvu9g1384 596 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 594 IPR030011 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1384 Pvu-Chr9 19704464 19708206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1384 1 593 GRAS Transcription Factor Family AT1G21450 59.866 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu9g1384 GRAS 1.1e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1384 - - gmx:100788103 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1384 9 19704464 19708206 Pvu9g1384 9 19704464 19708206 ECH
Pvu1g0664 1 8082288 8086349 Pvu9g1384 9 19704464 19708206 PCT