Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1383 ATGGAGGATTCTTCAGCAGGTGAAGACCCTAAGACTTGTCCCCGTGGCCACTGGAGACCTGCTGAGGATGAAAAGCTTAGACAACTTGTTGAACAATATGGTGCTCAAAACTGGAATTCAATTGCTGAGAAGCTCCAAGGAAGATCAG 148 0.4662 MEDSSAGEDPKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRS 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1383 49 Gene3D - 7 49 - -
Pvu9g1383 49 PANTHER TRANSCRIPTION FACTOR MYB56 7 49 - -
Pvu9g1383 49 SUPERFAMILY Homeodomain-like 12 49 IPR009057 -
Pvu9g1383 49 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 49 IPR017930 -
Pvu9g1383 49 MobiDBLite consensus disorder prediction 1 20 - -
Pvu9g1383 49 PANTHER MYB PROTEIN-RELATED 7 49 - -
Pvu9g1383 49 CDD SANT 18 49 IPR001005 -
Pvu9g1383 49 ProSiteProfiles Myb-like domain profile. 15 49 IPR001005 -
Pvu9g1383 49 Pfam Myb-like DNA-binding domain 15 49 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1383 Pvu-Chr9 19680960 19681373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1383 13 49 MYB Transcription Factor Family AT1G17950 78.378 5.08e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1383 K09422 - pvu:PHAVU_009G1337000 107.842